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13_1_40cm_4_scaffold_1021

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1021_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

2..514
DNA (513bp) protein (171aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_1_40cm_4_scaffold_1021_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

511..1473
DNA (963bp) protein (321aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
13_1_40cm_4_scaffold_1021_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1508..2692)
DNA (1185bp) protein (395aa)
group 1 glycosyl transferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
group 1 family glycosyltransferase id=7201127 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Glycosyltransferase
13_1_40cm_4_scaffold_1021_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2734..3366
DNA (633bp) protein (211aa)
Methyltransferase type 11 n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SQU4_PLABD
hypothetical protein; K07027 Tax=RBG_16_Gemmatimonadetes_66_8_curated
methyltransferase type 11
13_1_40cm_4_scaffold_1021_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3321..4286
DNA (966bp) protein (322aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
hypothetical membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_1021_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4283..6640
DNA (2358bp) protein (786aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_1021_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6633..8141
DNA (1509bp) protein (503aa)
putative polyprenol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
13_1_40cm_4_scaffold_1021_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8215..8889)
DNA (675bp) protein (225aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1021_trna_2
unknown

Not on your lists

comp(8973..9046)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_1021_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9069..9605)
DNA (537bp) protein (179aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
adenine phosphoribosyltransferase
13_1_40cm_4_scaffold_1021_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9621..9893)
DNA (273bp) protein (91aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Haemophilus pittmaniae HK 85 RepID=F9QC67_9PAST
13_1_40cm_4_scaffold_1021_11
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9901..10542)
DNA (642bp) protein (214aa)
SNARE associated Golgi protein-related protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E083_GEOSM
hypothetical protein
SNARE associated Golgi protein-related protein {ECO:0000313|EMBL:ACT16699.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" sour
13_1_40cm_4_scaffold_1021_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10535..11215)
DNA (681bp) protein (227aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_1_40cm_4_scaffold_1021_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11197..11946)
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT
13_1_40cm_4_scaffold_1021_14
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11943..12644)
DNA (702bp) protein (234aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=GWA2_Ignavibacteria_54_16_curated
Glycosyl transferase family 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG99_9BACT
glycosyl transferase, group 2 family protein
13_1_40cm_4_scaffold_1021_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12628..13005)
DNA (378bp) protein (126aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
MerR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory protein MerR
13_1_40cm_4_scaffold_1021_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13002..13928)
DNA (927bp) protein (309aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=2 Tax=Geobacter sulfurreducens RepID=GPDA_GEOSL
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
13_1_40cm_4_scaffold_1021_17
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(14038..14655)
DNA (618bp) protein (206aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] id=7200806 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Glycerol-3-phosphate acyltransferase
13_1_40cm_4_scaffold_1021_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14652..15170)
DNA (519bp) protein (173aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
engA; GTP-binding protein EngA
13_1_40cm_4_scaffold_1021_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15188..15949)
DNA (762bp) protein (254aa)
GTPase Der n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=DER_MOOTA
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
small GTP-binding protein domain-containing protein
13_1_40cm_4_scaffold_1021_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15946..17349)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1021_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17438..19165)
DNA (1728bp) protein (576aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_1021_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19168..20373)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI0003808F03
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88091.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1021_23
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20409..20693)
DNA (285bp) protein (95aa)
Glycoside hydrolase family 30 n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKD3_9BURK
Glycoside hydrolase family 30 {ECO:0000313|EMBL:ELX11876.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthi
glycoside hydrolase family protein
13_1_40cm_4_scaffold_1021_24
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20709..20891)
DNA (183bp) protein (61aa)
Glycoside hydrolase family 30 n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKD3_9BURK
Glycoside hydrolase family 30 {ECO:0000313|EMBL:ELX11876.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthi
glycoside hydrolase family protein
13_1_40cm_4_scaffold_1021_25
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21126..21917)
DNA (792bp) protein (264aa)
Glycoside hydrolase family 16 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSA6_HALO1
glycoside hydrolase family protein
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_40cm_4_scaffold_1021_trna_1
unknown

Not on your lists

comp(21942..22013)
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_1021_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22072..23664)
DNA (1593bp) protein (531aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_1021_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23667..24851)
DNA (1185bp) protein (395aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA id=5223158 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TIGR00299 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0272 protein
13_1_40cm_4_scaffold_1021_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24880..26037)
DNA (1158bp) protein (386aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
Displaying items 1-30 of 33 in total

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