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13_1_40cm_4_scaffold_1030

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1030_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

3..416
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003618F82
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
RNA polymerase ECF-subfamily sigma factor
13_1_40cm_4_scaffold_1030_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421..852)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LBG9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL89520.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF31
YCII-like protein
13_1_40cm_4_scaffold_1030_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(869..1267)
DNA (399bp) protein (133aa)
DoxX family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
DoxX family protein id=3435277 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DoxX family protein
13_1_40cm_4_scaffold_1030_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(1264..1668)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECP7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82459.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
YCII-like protein
13_1_40cm_4_scaffold_1030_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1693..1992)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038129D3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_1030_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1989..2672)
DNA (684bp) protein (228aa)
BNR/Asp-box repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
BNR/Asp-box repeat protein id=14428963 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
BNR/Asp-box repeat-containing protein
13_1_40cm_4_scaffold_1030_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(2714..2998)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000367A79D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_40cm_4_scaffold_1030_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3172..3693
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z6M4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETX01819.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_1030_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3712..4080
DNA (369bp) protein (123aa)
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJ32_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETX01818.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_1030_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4077..5270
DNA (1194bp) protein (398aa)
Bll2565 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89S40_BRADU
Acyl-CoA transferase {ECO:0000313|EMBL:ETR78045.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_1_40cm_4_scaffold_1030_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5263..5634)
DNA (372bp) protein (124aa)
Uncharacterized protein id=3716768 bin=GWA2_Methylomirabilis_73_35 species=Desulfurococcus fermentans genus=Desulfurococcus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_1030_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5757..7058
DNA (1302bp) protein (434aa)
leuC; 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) (EC:4.2.1.33) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
leuC; 3-isopropylmalate dehydratase large subunit 2 (Isopropylmalate isomerase 2) (Alpha-IPM isomerase 2) (IPMI 2) (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=4202745 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1030_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7055..7648
DNA (594bp) protein (198aa)
leuD; 3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) (EC:4.2.1.33) Tax=GWA2_Rokubacteria_73_35_curated
leuD; 3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) id=4202743 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1030_14
Legionella oakridgensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7995..10064
DNA (2070bp) protein (690aa)
SMC protein-like protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C4CE
RecF/RecN/SMC N terminal domain protein {ECO:0000313|EMBL:AHE65766.1}; TaxID=1268635 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legion
SMC protein-like protein
13_1_40cm_4_scaffold_1030_15
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10336..11955
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000380B472
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJX12963.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubon
13_1_40cm_4_scaffold_1030_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11952..12437
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFX4_9BRAD
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
13_1_40cm_4_scaffold_1030_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12434..12853
DNA (420bp) protein (140aa)
Pyridoxamine 5''-phosphate oxidase id=4492355 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein Tax=GWC2_Rokubacteria_70_16_curated
2SCG61.39; hypothetical protein
13_1_40cm_4_scaffold_1030_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13102..14409)
DNA (1308bp) protein (436aa)
HNH endonuclease id=3261972 bin=GWA2_Methylomirabilis_73_35 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HNH endonuclease Tax=GWA2_Rokubacteria_73_35_curated
HNH endonuclease
13_1_40cm_4_scaffold_1030_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14648..15181)
DNA (534bp) protein (178aa)
cupin id=4319704 bin=GWA2_Methylomirabilis_73_35 species=Sphingomonas elodea genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Cupin 2 barrel domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
cupin
13_1_40cm_4_scaffold_1030_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15350..16360
DNA (1011bp) protein (337aa)
aminocarboxymuconate-semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM04_9BRAD
13_1_40cm_4_scaffold_1030_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16357..17088)
DNA (732bp) protein (244aa)
alpha/beta family hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAFA
alpha/beta family hydrolase Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
alpha/beta hydrolase fold family protein
13_1_40cm_4_scaffold_1030_22
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17132..17785)
DNA (654bp) protein (218aa)
ZTL id=3636062 bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB21602.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
13_1_40cm_4_scaffold_1030_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17778..18167)
DNA (390bp) protein (130aa)
prevent-host-death family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Uncharacterized protein id=4699220 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death family protein
13_1_40cm_4_scaffold_1030_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18213..18536)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R4Z3_CUPTR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_1030_25
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18790..19317
DNA (528bp) protein (176aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBS0_THET1
Hydroxyacid dehydrogenase {ECO:0000313|EMBL:KIJ78104.1}; Flags: Fragment;; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Displaying 25 items

View Taxonomy