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13_1_40cm_4_scaffold_10400

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10400_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1443)
DNA (1443bp) protein (481aa)
Putative ABC transporter n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGK7_GEOOG
putative ABC transporter
Putative ABC transporter {ECO:0000313|EMBL:ADB72889.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (
13_1_40cm_4_scaffold_10400_2
unknown

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comp(1673..2212)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_4_scaffold_10400_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2214..3164)
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RBG_16_RIF_CHLX_70_13_curated
NAD-dependent epimerase/dehydratase n=1 Tax=uncultured prokaryote RepID=H5SKS3_9ZZZZ
nad-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_10400_4
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3227..3871
DNA (645bp) protein (215aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S6U2_INTC7
coenzyme F420-dependent NADP oxidoreductase
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:ADU46828.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" sour
13_1_40cm_4_scaffold_10400_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3868..4602
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA54_9GAMM
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AJE03978.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
13_1_40cm_4_scaffold_10400_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4609..5646)
DNA (1038bp) protein (346aa)
proline racemase; K01777 proline racemase [EC:5.1.1.4] Tax=RBG_16_Chloroflexi_63_12_curated
proline racemase; K01777 proline racemase [EC:5.1.1.4] id=24449599 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
proline racemase
13_1_40cm_4_scaffold_10400_7
unknown

Not on your lists

5764..6609
DNA (846bp) protein (282aa)

This feature has no annotations

13_1_40cm_4_scaffold_10400_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6606..7592)
DNA (987bp) protein (329aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ornithine cyclodeaminase (EC:4.3.1.12)
ornithine cyclodeaminase n=1 Tax=Streptomyces purpureus RepID=UPI0003671A35
13_1_40cm_4_scaffold_10400_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7602..8660)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein id=14629589 bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_10400_10
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

8723..8935
DNA (213bp) protein (71aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein id=14628898 bin=bin8_Chloro species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_10400_11
unknown

Not on your lists

9396..9551
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_10400_12
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(9542..10618)
DNA (1077bp) protein (359aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSE4_HALO1
PAS/PAC sensor hybrid histidine kinase
multi-sensor signal transduction histidine kinase Tax=CG_Arma_01
13_1_40cm_4_scaffold_10400_13
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10797..11639
DNA (843bp) protein (281aa)
Phosphate binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM0_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:EEG31138.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentos
pstS; high-affinity phosphate ABC-type import system, periplasmic component
13_1_40cm_4_scaffold_10400_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11688..13946
DNA (2259bp) protein (753aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
UPI0003D06F0D related cluster n=1 Tax=unknown RepID=UPI0003D06F0D
13_1_40cm_4_scaffold_10400_15
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

13946..15496
DNA (1551bp) protein (517aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZC64_9BACT
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCQ90883.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrosp
response regulator receiver protein
13_1_40cm_4_scaffold_10400_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15502..16983
DNA (1482bp) protein (494aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RX23_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB79243.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2
13_1_40cm_4_scaffold_10400_17
unknown

Not on your lists

16970..17767
DNA (798bp) protein (266aa)

This feature has no annotations

13_1_40cm_4_scaffold_10400_18
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

17764..18276
DNA (513bp) protein (171aa)
DNA-binding response regulator SrrA n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1G9_9FIRM
DNA-binding response regulator SrrA {ECO:0000313|EMBL:CDB43145.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
transcriptional regulator
13_1_40cm_4_scaffold_10400_19
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

18273..19016
DNA (744bp) protein (248aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein id=14428720 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_10400_20
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

19016..19726
DNA (711bp) protein (237aa)
Two component transcriptional regulator, LuxR family id=3810887 bin=GWC2_Chloroflexi_73_18 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LuxR family two component transcriptional regulator Tax=GWC2_RIF_CHLX_73_18_curated
putative NarL family two-component response regulator
13_1_40cm_4_scaffold_10400_21
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19787..20158
DNA (372bp) protein (124aa)
Two component transcriptional regulator, winged helix family protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NH80_9FIRM
Two component transcriptional regulator, winged helix family protein {ECO:0000313|EMBL:EGO64563.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Aceton
OmpR; response regulator
13_1_40cm_4_scaffold_10400_22
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

20172..21158
DNA (987bp) protein (329aa)
Two-component transcriptional regulatory protein n=1 Tax=Pseudoalteromonas arctica A 37-1-2 RepID=U1K9K3_9GAMM
HD-hydrolase domain-containing protein Tax=RBG_16_Chloroflexi_68_14_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_10400_23
unknown

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comp(21222..21515)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_10400_24
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21557..22219
DNA (663bp) protein (221aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDH7_ANADF
phage SPO1 DNA polymerase-like protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABS26773.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Ana
13_1_40cm_4_scaffold_10400_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

22405..23130
DNA (726bp) protein (242aa)
two-component system response regulator; K07670 two-component system, OmpR family, response regulator MtrA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE id=14629315 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
cheY; two component transcriptional regulator, winged helix family, CheY
13_1_40cm_4_scaffold_10400_26
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23295..23414
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:ADB30297.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 /
hypothetical protein
Displaying 26 items

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