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13_1_40cm_4_scaffold_1064

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1064_1
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(16..1275)
-----------------
DNA (1260bp)
protein (420aa)
Proteasome-activating nucleotidase n=1 Tax=Thermococcus sp. AM4 RepID=B7R180_9EURY
proteasome-activating AAA-ATPase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
13_1_40cm_4_scaffold_1064_2
unknown

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comp(1519..2019)
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

13_1_40cm_4_scaffold_1064_3
RBG_16_Archaea_50_20_curated, Archaea

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2416..2724
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein id=14429902 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1064_4
unknown

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comp(3023..4117)
-----------------
DNA (1095bp)
protein (365aa)

This feature has no annotations

13_1_40cm_4_scaffold_1064_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4330..5787
-----------------
DNA (1458bp)
protein (486aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037114AE
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
aldehyde dehydrogenase
13_1_40cm_4_scaffold_1064_6
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(5791..6201)
-----------------
DNA (411bp)
protein (137aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KP51_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_13_Chloroflexi_56_8b_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_40cm_4_scaffold_1064_7
unknown

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comp(6448..7008)
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

13_1_40cm_4_scaffold_1064_8
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7431..8585)
-----------------
DNA (1155bp)
protein (385aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C6E3_DESTA
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFM25134.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomon
13_1_40cm_4_scaffold_1064_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(8646..8954)
-----------------
DNA (309bp)
protein (103aa)
ethyl tert-butyl ether degradation EthD Tax=RBG_16_Chloroflexi_56_8_curated
ethyl tert-butyl ether degradation EthD id=24418701 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_4_scaffold_1064_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(8968..9969)
-----------------
DNA (1002bp)
protein (334aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036D6CCD
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_1064_11
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(10039..10869)
-----------------
DNA (831bp)
protein (277aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17); K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=RBG_16_Archaea_50_20_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase Enoyl-CoA hydratase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJX9_THEM7
13_1_40cm_4_scaffold_1064_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10835..11608)
-----------------
DNA (774bp)
protein (258aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17); K01692 enoyl-CoA hydratase [EC:4.2.1.17] Tax=RBG_16_Archaea_50_20_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase id=2237382 bin=GWA2_Ignavibacteria_55_11 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_4_scaffold_1064_13
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(11659..12540)
-----------------
DNA (882bp)
protein (294aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BKX9_9EURY
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGK61186.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sul
13_1_40cm_4_scaffold_1064_14

Not on your lists

comp(12537..13043)
-----------------
DNA (507bp)
protein (169aa)
Long-chain acyl-CoA thioesterase, BFIT_BACH family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A1K3_PELCD
Marine sediment metagenome DNA, contig: S01H1_S07440 {ECO:0000313|EMBL:GAG12337.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
long-chain acyl-CoA thioesterase
13_1_40cm_4_scaffold_1064_15
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13163..13501)
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7W0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42992.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
13_1_40cm_4_scaffold_1064_16
Nanoarchaeota archaeon SCGC AAA011-L22, Nanoarchaeota, Archaea

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comp(13989..14585)
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F6833
13_1_40cm_4_scaffold_1064_17
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(14715..14996)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7C7_KORCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB08356.1}; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (strain OPF8).;"
13_1_40cm_4_scaffold_1064_18
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15161..17161
-----------------
DNA (2001bp)
protein (667aa)
Pyrrolo-quinoline quinone n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RD00_METP4
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ADN35900.1}; Flags: Precursor;; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" so
13_1_40cm_4_scaffold_1064_19
unknown

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17240..17668
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

13_1_40cm_4_scaffold_1064_20
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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17866..18987
-----------------
DNA (1122bp)
protein (374aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9Z1_9ARCH
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1064_21
unknown

Not on your lists

19039..19386
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

13_1_40cm_4_scaffold_1064_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(19777..20688)
-----------------
DNA (912bp)
protein (304aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Bathyarchaeota_48_13_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D2V9_9ARCH
13_1_40cm_4_scaffold_1064_23
unknown

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comp(20695..21321)
-----------------
DNA (627bp)
protein (209aa)

This feature has no annotations

13_1_40cm_4_scaffold_1064_24

Not on your lists

comp(21520..22674)
-----------------
DNA (1155bp)
protein (385aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=115547 species="Archaea;
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=uncultured archaeon RepID=G3C972_9ARCH
13_1_40cm_4_scaffold_1064_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(22699..23934)
-----------------
DNA (1236bp)
protein (412aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AEN0_PYRYC
phenylalanyl-tRNA synthetase subunit beta
Displaying 25 items

View Taxonomy