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13_1_40cm_4_scaffold_1078

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1078_1
unknown

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1..486
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_4_scaffold_1078_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(390..644)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKU4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60003.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1078_3
unknown

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1347..1823
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_40cm_4_scaffold_1078_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2054..2566)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYY1_METPS id=5224306 bin=16ft_combo_ws3_JS1 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_4_scaffold_1078_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(2993..3400)
DNA (408bp) protein (136aa)
yneP; hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Thioesterase superfamily protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V542_TERSS
thioesterase superfamily protein
13_1_40cm_4_scaffold_1078_6
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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3521..4390
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI0003655460
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:BAJ47697.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarcha
13_1_40cm_4_scaffold_1078_7
MPF_Thermotogae_50_1627, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(4471..5529)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BGB0_9EURY
Putative uncharacterized protein Tax=MPF_Thermotogae_50_1627
hypothetical protein
13_1_40cm_4_scaffold_1078_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5679..6656)
DNA (978bp) protein (326aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin r
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=MER_METMA
13_1_40cm_4_scaffold_1078_9
unknown

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7095..8384
DNA (1290bp) protein (430aa)

This feature has no annotations

13_1_40cm_4_scaffold_1078_10
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

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comp(8422..9606)
DNA (1185bp) protein (395aa)
Nucleoside-binding protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FE14_9BACT
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins Tax=RBG_16_OP11_45_19_curated
basic membrane lipoprotein
13_1_40cm_4_scaffold_1078_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9924..11447
DNA (1524bp) protein (508aa)
ABC transporter, ATP-binding protein n=2 Tax=Ruminococcus lactaris RepID=B5CL70_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDY34016.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactari
ATPase component of uncharacterized ABC-type transporter
13_1_40cm_4_scaffold_1078_12
bacterium UASB270, Bacteria

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11723..12553
DNA (831bp) protein (277aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ADE9_9CLOT
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:GAK57541.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
inner-membrane translocator
13_1_40cm_4_scaffold_1078_13
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12543..13505
DNA (963bp) protein (321aa)
Putative ABC-type transport system, permease component n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IUP6_DESMD
ABC transporter permease
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:AFQ45455.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source
13_1_40cm_4_scaffold_1078_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(13518..14510)
DNA (993bp) protein (331aa)
Putative F420-dependent oxidoreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY37_9EURY
luciferase-like protein Tax=CSP1_2_Dadabacteria
oxidoreductase
13_1_40cm_4_scaffold_1078_15
unknown

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14656..15066
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_1078_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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15076..16071
DNA (996bp) protein (332aa)
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase (EC:1.5.99.11)
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ48942.1}; EC=1.5.99.11 {ECO:0000313|EMBL:BAJ48942.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9H3_9ARCH
13_1_40cm_4_scaffold_1078_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(16068..18431)
DNA (2364bp) protein (788aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding id=1833935 bin=GWD2_Deltaproteobacteria_55_8 species=Mesorhizobium australicum genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_4_scaffold_1078_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18520..19398
DNA (879bp) protein (293aa)
carbon-monoxide dehydrogenase (acceptor); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
Molybdopterin dehydrogenase, FAD-binding protein n=1 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QTX7_VULM7
molybdopterin dehydrogenase, FAD-binding protein
13_1_40cm_4_scaffold_1078_19
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19408..19869
DNA (462bp) protein (154aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F3Y8_9THEM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AHF10464.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
13_1_40cm_4_scaffold_1078_20
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(19911..20924)
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MA90_CALMQ
alcohol dehydrogenase
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABW01022.1}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirg
13_1_40cm_4_scaffold_1078_21
unknown

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20985..21158
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_1078_22

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21772..23142
DNA (1371bp) protein (457aa)
Phosphoglucosamine mutase (Pmm-pgm) {ECO:0000313|EMBL:AIF20584.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AIF20584.1};; TaxID=1456344 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
glmM; phosphoglucosamine mutase (EC:5.4.2.-)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4F5_9ARCH
13_1_40cm_4_scaffold_1078_23
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(23134..23958)
DNA (825bp) protein (275aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16) Tax=RBG_16_Thaumarchaeota_49_8_curated
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICP3_NITGG
13_1_40cm_4_scaffold_1078_24

Not on your lists

comp(24092..24793)
DNA (702bp) protein (234aa)
Phosphoglucomutase/phosphomannomutase (Pmm-pgm) {ECO:0000313|EMBL:AIF00238.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AIF00238.1};; TaxID=1455999 species="Archaea; Thaumarchaeota; environmental samples.;" sourc
Phosphoglucomutase/phosphomannomutase subunit alpha/beta n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB37_9ARCH
phosphoglucomutase/phosphomannomutase subunit alpha/beta
Displaying 24 items

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