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13_1_40cm_4_scaffold_1084

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1084_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..606
DNA (606bp) protein (202aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
parB-like partition protein
13_1_40cm_4_scaffold_1084_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

603..1403
DNA (801bp) protein (267aa)
peptidase M23B (EC:3.4.24.-)
Peptidase M23B n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQE5_THEPS
Cell wall endopeptidase, family M23/M37 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1084_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1421..1759
DNA (339bp) protein (113aa)
Cell shape determination protein CcmA n=1 Tax=uncultured bacterium RepID=K1YVZ2_9BACT
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1084_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1915..2667
DNA (753bp) protein (251aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NGG1p interacting factor 3 protein, NIF3
13_1_40cm_4_scaffold_1084_5
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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2679..3872
DNA (1194bp) protein (398aa)
Major facilitator superfamily MFS_1 n=2 Tax=Chloroflexus RepID=A9WGT9_CHLAA
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABY36255.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chlor
13_1_40cm_4_scaffold_1084_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3869..5032)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92075.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1084_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5037..5669)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1084_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5666..6229)
DNA (564bp) protein (188aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1084_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6222..6779)
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1084_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6897..8630
DNA (1734bp) protein (578aa)
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1084_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8575..8817
DNA (243bp) protein (81aa)
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1084_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8889..10373
DNA (1485bp) protein (495aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_1_40cm_4_scaffold_1084_13
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10370..11251
DNA (882bp) protein (294aa)
Putative uncharacterized protein id=4734432 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
putative phosphohydrolase; K07098 Tax=GWC2_Deltaproteobacteria_55_46b_curated
putative phosphohydrolase
13_1_40cm_4_scaffold_1084_14
unknown

Not on your lists

comp(11244..11528)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_1084_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11525..12577)
DNA (1053bp) protein (351aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1084_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12574..12840)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1084_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12902..14089
DNA (1188bp) protein (396aa)
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
class V aminotransferase id=14632116 bin=bin9_gal15 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
class V aminotransferase
13_1_40cm_4_scaffold_1084_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14046..14804
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM6_GEMAT
hypothetical protein; K06966 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_1084_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14801..15940
DNA (1140bp) protein (380aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Deoxyhypusine synthase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLS6_GLOVI id=5224706 bin=16ft_combo_ws3_JS1 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
deoxyhypusine synthase-like protein
13_1_40cm_4_scaffold_1084_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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16002..17441
DNA (1440bp) protein (480aa)
Major facilitator family transporter n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N611_ERYLH
major facilitator family transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
major facilitator family transporter
13_1_40cm_4_scaffold_1084_21
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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17470..18567
DNA (1098bp) protein (366aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Blr7451 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89DI8_BRADU
hypothetical protein
13_1_40cm_4_scaffold_1084_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18554..19555
DNA (1002bp) protein (334aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1084_23
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

19575..20327
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_1084_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20332..21960)
DNA (1629bp) protein (543aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_4_scaffold_1084_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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22640..23380
DNA (741bp) protein (247aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_4_scaffold_1084_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23380..25518
DNA (2139bp) protein (713aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_4_scaffold_1084_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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25539..26471
DNA (933bp) protein (311aa)
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
Proline dehydrogenase
Proline dehydrogenase {ECO:0000313|EMBL:AHG92070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1084_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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26501..26800
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1084_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

26797..27723
DNA (927bp) protein (309aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GDD9_CHLAD
ribosome biogenesis GTPase RsgA
13_1_40cm_4_scaffold_1084_30
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27680..28000)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMX6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL01915.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM
Displaying items 1-30 of 36 in total

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