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13_1_40cm_4_scaffold_1090

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1090_1
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

comp(2..1054)
DNA (1053bp) protein (351aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITI7_KORVE
TPR repeat-containing serine/threonin protein kinase Tax=RBG_13_Aminicenantes_64_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1090_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1196..2254)
DNA (1059bp) protein (353aa)
AMP-dependent synthetase and ligase (EC:6.2.1.3) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
long-chain fatty acid--CoA ligase n=1 Tax=Scytonema hofmanni RepID=UPI00034DA0B6
13_1_40cm_4_scaffold_1090_3
unknown

Not on your lists

2348..2791
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_4_scaffold_1090_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2692..4605)
DNA (1914bp) protein (638aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002ED6107
PAS/PAC sensor hybrid histidine kinase
13_1_40cm_4_scaffold_1090_5

Not on your lists

4851..5693
DNA (843bp) protein (281aa)
Secreted protein n=1 Tax=uncultured microorganism RepID=F8UH26_9ZZZZ
Secreted protein {ECO:0000313|EMBL:AEI30333.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
13_1_40cm_4_scaffold_1090_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5711..6865)
DNA (1155bp) protein (385aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N9_GEMAT
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein kinase
13_1_40cm_4_scaffold_1090_7
unknown

Not on your lists

comp(7252..7515)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_1090_8
unknown

Not on your lists

comp(7512..7814)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_1090_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7871..9061
DNA (1191bp) protein (397aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC06_GEMAT
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AHG89464.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1090_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9058..12255
DNA (3198bp) protein (1066aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC05_GEMAT
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:AHG89465.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
13_1_40cm_4_scaffold_1090_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12257..13777
DNA (1521bp) protein (507aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC04_GEMAT
RND efflux system, outer membrane lipoprotein, NodT family
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:AHG89466.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1090_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13774..14235
DNA (462bp) protein (154aa)
MarR family transcriptional regulator id=12557865 bin=CNBR_ACIDO species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MarR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
SC4A7.26; MarR family transcriptonal regulator
13_1_40cm_4_scaffold_1090_13
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

14266..14670
DNA (405bp) protein (135aa)
DoxX family protein id=2885630 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
DoxX family protein Tax=GWA1_Bdellovibrionales_52_35_curated
DoxX protein
13_1_40cm_4_scaffold_1090_14
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(14674..16350)
DNA (1677bp) protein (559aa)
hypothetical protein id=24486796 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein
13_1_40cm_4_scaffold_1090_15
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

16694..16888
DNA (195bp) protein (65aa)
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
XRE family transcriptional regulator id=14628080 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
13_1_40cm_4_scaffold_1090_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17063..17281)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RGT1_9DELT
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Translation initiation factor IF-1
13_1_40cm_4_scaffold_1090_17
Zavarzinella formosa, Zavarzinella, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17390..17746)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D4880A
13_1_40cm_4_scaffold_1090_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17875..18072
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003769A4F
Dehydrogenase {ECO:0000313|EMBL:CDP53664.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
13_1_40cm_4_scaffold_1090_19
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18250..18543
DNA (294bp) protein (98aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudomonas putida (strain F1 / ATCC 700007) RepID=A5W1E1_PSEP1
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABQ77951.1}; TaxID=351746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;
13_1_40cm_4_scaffold_1090_20
unknown

Not on your lists

18931..19119
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_1090_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19116..19646)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GE09_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF664
13_1_40cm_4_scaffold_1090_22
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19685..20554)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003664363
Multidrug transporter {ECO:0000313|EMBL:KEO81686.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
multidrug transporter
13_1_40cm_4_scaffold_1090_23
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20572..21348)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. GHH01 RepID=L7ZYD4_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE22037.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
13_1_40cm_4_scaffold_1090_24
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(21394..22329)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003647B52
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEB12499.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrotherm
13_1_40cm_4_scaffold_1090_25
unknown

Not on your lists

22427..22684
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_1090_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22762..23172
DNA (411bp) protein (137aa)
GCN5-related N-acetyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKP8_KORVE
N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABF42552.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_1_40cm_4_scaffold_1090_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23167..26277)
DNA (3111bp) protein (1037aa)
polyphosphate kinase (EC:2.7.4.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
ppk; polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JRZ3_SYNJA
13_1_40cm_4_scaffold_1090_28

Not on your lists

comp(26291..27385)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003753D68
Marine sediment metagenome DNA, contig: S12H4_L01509 {ECO:0000313|EMBL:GAI87705.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_1090_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27453..29195
DNA (1743bp) protein (581aa)
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FXS5_9BURK
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1090_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29177..29614
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 55 in total

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