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13_1_40cm_4_scaffold_1134

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1134_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1..294
DNA (294bp) protein (98aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1134_2

Not on your lists

comp(317..682)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Candidatus Desulfamplus magnetomortis RepID=L0R6M7_9DELT
Marine sediment metagenome DNA, contig: S01H4_S18999 {ECO:0000313|EMBL:GAH14822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_1134_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(815..1450)
DNA (636bp) protein (212aa)
O-methyltransferase family 3 id=5009188 bin=GWA2_Ignavibacteria_55_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
O-methyltransferase family protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
O-methyltransferase family protein
13_1_40cm_4_scaffold_1134_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1453..2298)
DNA (846bp) protein (282aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V0_ANADF
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABS25146.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_4_scaffold_1134_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2326..3162)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619ACB
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein
13_1_40cm_4_scaffold_1134_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3182..5728
DNA (2547bp) protein (849aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Acidobacteria_70_10_curated
DNA ligase D n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V2_ANADF
DNA ligase D
13_1_40cm_4_scaffold_1134_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5730..6407
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F3A1F9
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51939.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
alpha/beta hydrolase
13_1_40cm_4_scaffold_1134_8
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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6484..6897
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WJV9_CHLAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY36575.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
13_1_40cm_4_scaffold_1134_9
unknown

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6908..7039
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_4_scaffold_1134_10
unknown

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7036..7407
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_1134_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7462..8628
DNA (1167bp) protein (389aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT
13_1_40cm_4_scaffold_1134_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8629..9042)
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ACT domain-containing protein id=4139003 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acT domain-containing protein
13_1_40cm_4_scaffold_1134_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9110..10468)
DNA (1359bp) protein (453aa)
putative S1B family peptidase (EC:3.4.21.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative S1B family peptidase (EC:3.4.21.-)
Putative S1B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U7_GEMAT
13_1_40cm_4_scaffold_1134_14

Not on your lists

10590..13913
DNA (3324bp) protein (1108aa)
Glycosyl hydrolase BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1C3I3_9ZZZZ
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD75448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR/Asp-box repeat-containing protein
13_1_40cm_4_scaffold_1134_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

13953..15047
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH40_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90782.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
hypothetical protein
13_1_40cm_4_scaffold_1134_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15073..17148)
DNA (2076bp) protein (692aa)
Glucose dehydrogenase, Gcd and cytochrome c-like domain n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IZ88_DEIGD
Pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:AHG90260.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1134_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17317..18216)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W779_UNCMA
protein of unknown function DUF4349
Uncharacterized protein {ECO:0000313|EMBL:AHG93147.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1134_18
Gracilimonas tropica, Gracilimonas, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18312..19034
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036CC1CF
13_1_40cm_4_scaffold_1134_19
unknown

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19044..19340
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_1134_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(19349..20161)
DNA (813bp) protein (271aa)
Pyrroline-5-carboxylate reductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM0_KORVE
pyrroline-5-carboxylate reductase
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
13_1_40cm_4_scaffold_1134_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20158..20991)
DNA (834bp) protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CDM65366.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CDM65366.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacte
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIY0_RHOMR
13_1_40cm_4_scaffold_1134_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20978..21901)
DNA (924bp) protein (308aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=DAPA_KORVE
dihydrodipicolinate synthase
13_1_40cm_4_scaffold_1134_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21898..22614)
DNA (717bp) protein (239aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Py
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R26_SOLUE
13_1_40cm_4_scaffold_1134_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22611..23627)
DNA (1017bp) protein (339aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:CDM65369.1}; EC=3.5.1.16 {ECO:0000313|EMBL:CDM65369.1};; TaxID=454194 species="Bacteria; Acidobacteri
peptidase dimerization domain-containing protein; K01438 acetylornithine deacetylase [EC:3.5.1.16] id=12554321 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M20
13_1_40cm_4_scaffold_1134_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(23624..24202)
DNA (579bp) protein (193aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomon
Aspartokinase id=2690285 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
aspartate kinase
13_1_40cm_4_scaffold_1134_26
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

25416..26948
DNA (1533bp) protein (511aa)
Putative ammonium transporter sll0108 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHY0_9DELT
amt-1; ammonium transporter; K03320 ammonium transporter, Amt family Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
ammonium transporter
13_1_40cm_4_scaffold_1134_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26948..27340
DNA (393bp) protein (131aa)
nitrogen regulatory protein P-II n=1 Tax=Deinococcus wulumuqiensis RepID=UPI0003479EEB
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AHG93827.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1134_28
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

27337..28530
DNA (1194bp) protein (398aa)
hypothetical protein id=14428767 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
13_1_40cm_4_scaffold_1134_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(28524..29408)
DNA (885bp) protein (295aa)
Membrane protein n=1 Tax=uncultured bacterium RepID=K7PD99_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_4_scaffold_1134_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(29635..30213)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRA4_KORVE
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
Displaying items 1-30 of 39 in total

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