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13_1_40cm_4_scaffold_11539

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11539_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..204
-----------------
DNA (204bp)
protein (68aa)
Putative uncharacterized protein id=4388235 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_11539_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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201..1097
-----------------
DNA (897bp)
protein (299aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptidase, M23/M37 family id=4388234 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_11539_3
Solanum tuberosum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

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comp(1094..1390)
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Solanum tuberosum RepID=M1BRI8_SOLTU
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400051265}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyl
infB; translation initiation factor IF-2
13_1_40cm_4_scaffold_11539_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1476..2531)
-----------------
DNA (1056bp)
protein (352aa)
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase id=3659323 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_11539_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2533..2829)
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4388230 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_11539_6
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2901..4013
-----------------
DNA (1113bp)
protein (371aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1245469 species="Bacteria; Proteobacter
Putative homoserine O-acetyltransferase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A055_9BRAD
putative homoserine O-acetyltransferase
13_1_40cm_4_scaffold_11539_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4017..4676)
-----------------
DNA (660bp)
protein (220aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4047992 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
13_1_40cm_4_scaffold_11539_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4690..5430)
-----------------
DNA (741bp)
protein (247aa)
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter family protein id=4048078 bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
13_1_40cm_4_scaffold_11539_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5423..6397)
-----------------
DNA (975bp)
protein (325aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family id=4851658 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter membrane protein 2, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter membrane protein 2, HAAT family
13_1_40cm_4_scaffold_11539_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6394..6579)
-----------------
DNA (186bp)
protein (62aa)
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_
Putative permease protein, branched-chain amino acid ABC-type transport system id=4851657 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease
13_1_40cm_4_scaffold_11539_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6567..7190)
-----------------
DNA (624bp)
protein (208aa)
Putative permease protein, branched-chain amino acid ABC-type transport system id=4558917 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_
branched-chain amino acid transport system / permease component family protein
13_1_40cm_4_scaffold_11539_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(8469..9311)
-----------------
DNA (843bp)
protein (281aa)
gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17] Tax=GWA2_Rokubacteria_73_35_curated
gluconolactonase (EC:3.1.1.17)
Gluconolactonase id=4019697 bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium ciceri genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_11539_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(9308..9490)
-----------------
DNA (183bp)
protein (61aa)
4-oxalocrotonate tautomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-oxalocrotonate tautomerase id=4048082 bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_11539_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9830..10738
-----------------
DNA (909bp)
protein (303aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3784125 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_11539_15
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10739..11149)
-----------------
DNA (411bp)
protein (137aa)
Putative dehydratase, MaoC-like domain n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WGX3_RALSL
Putative dehydratase, MaoC-like domain {ECO:0000313|EMBL:CCF99028.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralst
putative dehydratase, MaoC-like domain
13_1_40cm_4_scaffold_11539_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11146..12372)
-----------------
DNA (1227bp)
protein (409aa)
Cytochrome P450 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THY2_TISMK
Uncharacterized protein {ECO:0000313|EMBL:ETX02578.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
pksS; cytochrome P450
13_1_40cm_4_scaffold_11539_17
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12475..12960
-----------------
DNA (486bp)
protein (162aa)
hemerythrin n=1 Tax=Pseudomonas fluorescens RepID=UPI000316D1B5
Hemerythrin HHE cation binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AJE19610.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
13_1_40cm_4_scaffold_11539_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12957..13382)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036908E2
hypothetical protein
13_1_40cm_4_scaffold_11539_19
unknown

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14014..14430
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

13_1_40cm_4_scaffold_11539_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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14465..14818
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3956328 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_11539_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14818..15219
-----------------
DNA (402bp)
protein (134aa)
Redoxin domain protein id=4888001 bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_11539_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15229..15642
-----------------
DNA (414bp)
protein (138aa)
redoxin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Redoxin domain protein id=4888000 bin=GWC2_Methylomirabilis_70_24 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_4_scaffold_11539_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15662..15823
-----------------
DNA (162bp)
protein (54aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4388217 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_11539_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15823..16074
-----------------
DNA (252bp)
protein (84aa)
His Kinase A (phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/GAF domain protein Tax=GWC2_Rokubacteria_70_16_curated
Histidine kinase,HAMP domain-containing protein,histidine kinase,cache domain-containing protein,GAF domain-containing protein id=3112752 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two-component hybrid sensor and regulator
Displaying 24 items

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