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13_1_40cm_4_scaffold_1230

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1230_1
unknown

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comp(27..947)
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_40cm_4_scaffold_1230_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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963..1985
DNA (1023bp) protein (341aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
13_1_40cm_4_scaffold_1230_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1982..2776)
DNA (795bp) protein (265aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3N6_TERSS
13_1_40cm_4_scaffold_1230_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2959..3447)
DNA (489bp) protein (163aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
ial:IALB_1560 dacB; D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=720817 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
13_1_40cm_4_scaffold_1230_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3413..4333)
DNA (921bp) protein (307aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AHG90077.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1230_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4371..5729)
DNA (1359bp) protein (453aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1230_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5851..8070
DNA (2220bp) protein (740aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
surface antigen (D15)
13_1_40cm_4_scaffold_1230_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8070..10811
DNA (2742bp) protein (914aa)
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1230_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10774..12429
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF490
13_1_40cm_4_scaffold_1230_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12430..12903
DNA (474bp) protein (158aa)
Diacylglycerol kinase catalytic region n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLF9_ROSCS
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
diacylglycerol kinase catalytic subunit
13_1_40cm_4_scaffold_1230_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12936..13328
DNA (393bp) protein (131aa)
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1230_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13321..14664
DNA (1344bp) protein (448aa)
Putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMS4_9BACT
acetoacetate metabolism regulatory protein AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_40cm_4_scaffold_1230_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14682..14864
DNA (183bp) protein (61aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1230_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(14861..15475)
DNA (615bp) protein (205aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator receiver
13_1_40cm_4_scaffold_1230_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15512..16429
DNA (918bp) protein (306aa)
Peptidase S58 DmpA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G670_CHLAD
peptidase S58 DmpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase S58 DmpA
13_1_40cm_4_scaffold_1230_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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16422..17414
DNA (993bp) protein (331aa)
NlpC/P60 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z3_GEMAT
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:BAH37653.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_1230_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17468..18169
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1230_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18166..18750
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEZ1_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90090.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1230_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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18747..19496
DNA (750bp) protein (250aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1230_20
unknown

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19496..19816
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_1230_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19867..20199
DNA (333bp) protein (111aa)
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YNB5_9BACT
holo-acyl-carrier-protein synthase
13_1_40cm_4_scaffold_1230_22
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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20231..22006
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003771BE8
Putative Iron permease FTR1, contains cytochrome c region {ECO:0000313|EMBL:CCQ91610.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source=
iron permease FTR1
13_1_40cm_4_scaffold_1230_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(21971..22816)
DNA (846bp) protein (282aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
13_1_40cm_4_scaffold_1230_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(22813..23856)
DNA (1044bp) protein (348aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
13_1_40cm_4_scaffold_1230_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(23849..24499)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AYD7_KROS4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Displaying 25 items

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