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13_1_40cm_4_scaffold_124

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_124_1
unknown

Not on your lists

247..753
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_2
unknown

Not on your lists

819..1172
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_3
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(1274..1744)
-----------------
DNA (471bp)
protein (157aa)
UspA domain protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N7Y3_9ARCH
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:BAJ48402.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum
13_1_40cm_4_scaffold_124_4
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1988..2515
-----------------
DNA (528bp)
protein (176aa)
Universal stress protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHY2_9FIRM
UspA domain protein {ECO:0000313|EMBL:EEG77056.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;
universal stress protein
13_1_40cm_4_scaffold_124_5
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2578..3516)
-----------------
DNA (939bp)
protein (313aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CS31_METMJ
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp.
13_1_40cm_4_scaffold_124_6

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comp(3526..4842)
-----------------
DNA (1317bp)
protein (439aa)
Arginine deiminase n=1 Tax=mine drainage metagenome RepID=T1AB92_9ZZZZ
Arginine deiminase {ECO:0000313|EMBL:EQD54053.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
amidinotransferase
13_1_40cm_4_scaffold_124_7
Fervidicoccus fontis, Fervidicoccus, Fervidicoccales, Thermoprotei, Crenarchaeota, Archaea

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comp(4855..5778)
-----------------
DNA (924bp)
protein (308aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1163730 species="Arch
Ornithine carbamoyltransferase, catabolic n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1N8_FERFK
ornithine carbamoyltransferase
13_1_40cm_4_scaffold_124_8
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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5923..6927
-----------------
DNA (1005bp)
protein (335aa)
Membrane associated phosphoesterase n=3 Tax=Sulfolobus acidocaldarius RepID=M1ISQ7_9CREN
membrane associated phosphoesterase
Membrane associated phosphoesterase {ECO:0000313|EMBL:AAY81075.1}; TaxID=330779 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldar
13_1_40cm_4_scaffold_124_9
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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7045..8277
-----------------
DNA (1233bp)
protein (411aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BNM4_9EURY
Na/H antiporter
Na /H antiporter {ECO:0000313|EMBL:AIY89598.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
13_1_40cm_4_scaffold_124_10
unknown

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comp(8291..8737)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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8977..9615
-----------------
DNA (639bp)
protein (213aa)
Dinucleotide-binding protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HJH7_9EURY
NADP oxidoreductase, coenzyme F420-dependent; K06988 Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_124_12
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9668..10714)
-----------------
DNA (1047bp)
protein (349aa)
High-affinity nickel-transporter n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I6Y2_METB6
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ABS55493.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanore
13_1_40cm_4_scaffold_124_13

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10876..11292
-----------------
DNA (417bp)
protein (139aa)
Putative nickel-responsive regulator n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=NIKR_ARCFU
Marine sediment metagenome DNA, contig: S03H2_S10577 {ECO:0000313|EMBL:GAH69409.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
13_1_40cm_4_scaffold_124_14
unknown

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11562..13109
-----------------
DNA (1548bp)
protein (516aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_15
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(13169..13579)
-----------------
DNA (411bp)
protein (137aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCT6_THET1
NifU family SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ACZ42601.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_4_scaffold_124_16
RBG_16_Archaea_50_20_curated, Archaea

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comp(13576..14847)
-----------------
DNA (1272bp)
protein (424aa)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7) Tax=RBG_16_Archaea_50_20_curated
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQH5_9ARCH
13_1_40cm_4_scaffold_124_17
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14905..15285)
-----------------
DNA (381bp)
protein (127aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQG2_KYRT2
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ADG06571.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae
13_1_40cm_4_scaffold_124_18

Not on your lists

comp(15371..16141)
-----------------
DNA (771bp)
protein (257aa)
Fe-S cluster assembly ATP-binding protein SufC n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPH1_9CHLR
FeS assembly ATPase (SufC) {ECO:0000313|EMBL:AIF15981.1}; TaxID=1456261 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_72_A09.;"
FeS assembly ATPase SufC
13_1_40cm_4_scaffold_124_19
unknown

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16145..16843
-----------------
DNA (699bp)
protein (233aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_20
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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16903..17256
-----------------
DNA (354bp)
protein (118aa)
Large-conductance mechanosensitive channel n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KIJ2_9ARCH
Large-conductance mechanosensitive channel {ECO:0000313|EMBL:EGG42736.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Cand
mscL; large-conductance mechanosensitive ion channel
13_1_40cm_4_scaffold_124_21
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(17288..17878)
-----------------
DNA (591bp)
protein (197aa)
Multiple antibiotic resistance protein MarC family n=2 Tax=Crenarchaeota RepID=H5SVV9_9CREN
multiple antibiotic transporter
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
13_1_40cm_4_scaffold_124_22
unknown

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comp(18278..18781)
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_23
RBG_16_Archaea_50_20_curated, Archaea

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18974..20389
-----------------
DNA (1416bp)
protein (472aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Archaea_50_20_curated
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3B0_THEA1
13_1_40cm_4_scaffold_124_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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20514..21350
-----------------
DNA (837bp)
protein (279aa)
Cobalt-zinc-cadmium resistance protein n=3 Tax=Lactobacillus rhamnosus RepID=S4ZW36_LACRH
Cobalt-zinc-cadmium resistance protein
Cation transporter {ECO:0000313|EMBL:KIC98228.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
13_1_40cm_4_scaffold_124_25
unknown

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comp(21334..21507)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_124_26

Not on your lists

comp(21622..22047)
-----------------
DNA (426bp)
protein (142aa)
Transcriptional regulator MntR n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XW30_BACIE
DtxR family iron dependent repressor {ECO:0000313|EMBL:AIF16319.1}; TaxID=1456267 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_73_E02.;"
putative iron (metal) dependent repressor, DtxR family
13_1_40cm_4_scaffold_124_27
AR11, Woesearchaeaota, DPANN, Archaea

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22212..23537
-----------------
DNA (1326bp)
protein (442aa)
Divalent metal cation transporter MntH n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DR80_9BACI
Divalent metal cation transporter MntH Tax=AR11
mntH; putative manganese transport protein MntH
13_1_40cm_4_scaffold_124_28
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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23658..24068
-----------------
DNA (411bp)
protein (137aa)
50S ribosomal protein L18e n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S039_FERPA
ribosomal protein L15
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus
13_1_40cm_4_scaffold_124_29
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(24079..25809)
-----------------
DNA (1731bp)
protein (577aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCE8_THET1
Antiseptic resistance protein {ECO:0000313|EMBL:KJF17570.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferr
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_4_scaffold_124_30
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25923..26387
-----------------
DNA (465bp)
protein (155aa)
Transcriptional regulator, HxlR family n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GG12_METPE
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACL16086.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="
Displaying 30 items

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