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13_1_40cm_4_scaffold_1262

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1262_1
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..196
DNA (195bp) protein (65aa)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WS75_ALIAD
icd; isocitrate/isopropylmalate dehydrogenase
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:ACV57509.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacill
13_1_40cm_4_scaffold_1262_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

245..880
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9E9_SORC5
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_40cm_4_scaffold_1262_3

Not on your lists

comp(861..1622)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA024-D14 RepID=UPI0003754193
Uncharacterized protein {ECO:0000313|EMBL:KGA18552.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
LmbE family protein
13_1_40cm_4_scaffold_1262_4
unknown

Not on your lists

comp(1642..3522)
DNA (1881bp) protein (627aa)

This feature has no annotations

13_1_40cm_4_scaffold_1262_5
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(3581..4918)
DNA (1338bp) protein (446aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
Pyruvate kinase n=1 Tax=Thermincola potens (strain JR) RepID=D5XA33_THEPJ
pyruvate kinase
13_1_40cm_4_scaffold_1262_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4984..5418)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000368C3AC
ribonuclease with PIN and NYN domains
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_40cm_4_scaffold_1262_7
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5488..6759)
DNA (1272bp) protein (424aa)
membrane protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036021A0
Membrane protein {ECO:0000313|EMBL:AJE40422.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
Zn-dependent protease
13_1_40cm_4_scaffold_1262_8
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6756..7502)
DNA (747bp) protein (249aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0T3_DESAP
RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ACA58754.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Des
13_1_40cm_4_scaffold_1262_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7499..8905)
DNA (1407bp) protein (469aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGU4_CHLTF
13_1_40cm_4_scaffold_1262_10
Prochlorococcus marinus, Prochlorococcus, Prochlorales, Cyanobacteria, Bacteria

Not on your lists

comp(8977..9459)
DNA (483bp) protein (161aa)
trmD; bifunctional tRNA methyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.1.1.31 4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|SAAS:SAAS00218911}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274586};; EC=2.1.1.228 {ECO:0000256|SAAS:SAAS00014917};; EC=4.6.1.12 {ECO:0000
Putative bifunctional enzyme: tRNA methyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Prochlorococcus marinus (strain MIT 9303) RepID=A2CB28_PROM3
13_1_40cm_4_scaffold_1262_11
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(9456..10145)
DNA (690bp) protein (230aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=14630656 bin=bin9_gal15 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
13_1_40cm_4_scaffold_1262_12
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10147..11229)
DNA (1083bp) protein (361aa)
PilT protein domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WTZ8_ALIAD
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ACV59740.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocalda
13_1_40cm_4_scaffold_1262_13
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11240..12628)
DNA (1389bp) protein (463aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA n=2 Tax=Rhodothermus marinus RepID=D0MEJ2_RHOM4 id=5225210 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=CG_Anaero_02
13_1_40cm_4_scaffold_1262_14
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12863..13816
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000377048B
Uncharacterized protein {ECO:0000313|EMBL:KJH69821.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_40cm_4_scaffold_1262_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13810..14607)
DNA (798bp) protein (266aa)
RDD domain-containing protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ICJ5_9CHLR
RDD domain-containing protein Tax=RBG_16_Chloroflexi_63_12_curated
RDD domain-containing protein
13_1_40cm_4_scaffold_1262_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14628..15635
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI82_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU57182.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus cas
13_1_40cm_4_scaffold_1262_17
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15580..16995)
DNA (1416bp) protein (472aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UUC2_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90225.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
13_1_40cm_4_scaffold_1262_18
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17012..17977)
DNA (966bp) protein (322aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GC99_CHLAD
ATPase
ATPase {ECO:0000313|EMBL:EFO80810.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoid
13_1_40cm_4_scaffold_1262_19
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17986..19116)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM36_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58591.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
13_1_40cm_4_scaffold_1262_20
unknown

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comp(19113..19988)
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_40cm_4_scaffold_1262_21
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20035..20865)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000346CABB
Putative integral membrane protein {ECO:0000313|EMBL:EFG07177.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus
hypothetical protein
13_1_40cm_4_scaffold_1262_22
R_OP11_41_12, Microgenomates, Bacteria

Not on your lists

20934..21332
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037F4E13
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_41_12_curated
response regulator receiver protein
13_1_40cm_4_scaffold_1262_23
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(21469..23970)
DNA (2502bp) protein (834aa)
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=CSP1_4_Chloroflexi
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=14630136 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ClpC ATPase
13_1_40cm_4_scaffold_1262_24
unknown

Not on your lists

24109..25692
DNA (1584bp) protein (528aa)

This feature has no annotations

13_1_40cm_4_scaffold_1262_25
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(25827..27020)
DNA (1194bp) protein (398aa)
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 id=14630137 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 Tax=CSP1_4_Chloroflexi
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
13_1_40cm_4_scaffold_1262_26
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(27114..27929)
DNA (816bp) protein (272aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=PANC_ROSCS
13_1_40cm_4_scaffold_1262_27
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27967..28824)
DNA (858bp) protein (286aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=2 Tax=Syntrophus aciditrophicus (strain SB) RepID=PANB_SYNAS
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=S_Thermacetogenium_phaeum_55_64
13_1_40cm_4_scaffold_1262_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28821..29582)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S9F5_9DELT
NADP oxidoreductase coenzyme F420-dependent Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADP oxidoreductase coenzyme F420-dependent
13_1_40cm_4_scaffold_1262_29
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(29676..31550)
DNA (1875bp) protein (625aa)
metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RBG_16_RIF_CHLX_69_14_curated
metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] id=14629949 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
13_1_40cm_4_scaffold_1262_30
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31547..32863)
DNA (1317bp) protein (439aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCU5_ANADF
tRNA(Ile)-lysidine synthetase
Displaying items 1-30 of 34 in total

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