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13_1_40cm_4_scaffold_1280

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1280_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGW3_ANADE
13_1_40cm_4_scaffold_1280_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(327..1133)
DNA (807bp) protein (269aa)
indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase n=1 Tax=Salinispora tropica RepID=UPI00037AC6D1
13_1_40cm_4_scaffold_1280_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1130..2167)
DNA (1038bp) protein (346aa)
anthranilate phosphoribosyltransferase; K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Anthranilate phosphoribosyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EH67_9CHLR
anthranilate phosphoribosyltransferase
13_1_40cm_4_scaffold_1280_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2154..2777)
DNA (624bp) protein (208aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
trpG; Anthranilate synthase component 2 (EC:4.1.3.27)
Glutamine amidotransferase, class I n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L5T2_9ACTO
13_1_40cm_4_scaffold_1280_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2774..4210)
DNA (1437bp) protein (479aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
anthranilate synthase, component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] id=14632928 bin=bin9_gal15 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
anthranilate synthase component I (EC:4.1.3.27)
13_1_40cm_4_scaffold_1280_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4598..5026
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1280_7
unknown

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comp(5035..5535)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_40cm_4_scaffold_1280_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5562..6257)
DNA (696bp) protein (232aa)
Integral membrane protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ELA5_AMYSD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
integral membrane protein
13_1_40cm_4_scaffold_1280_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6254..7234)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2Q5_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89582.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1280_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7355..9292
DNA (1938bp) protein (646aa)
Cyclic nucleotide-binding protein n=1 Tax=uncultured bacterium RepID=K2BXB5_9BACT
cyclic nucleotide-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
cyclic nucleotide-binding protein
13_1_40cm_4_scaffold_1280_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9296..9553)
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1280_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9556..10125)
DNA (570bp) protein (190aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNB5_DESMR
2'-5' RNA ligase
13_1_40cm_4_scaffold_1280_13
unknown

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comp(10160..10309)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_1280_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10413..11510)
DNA (1098bp) protein (366aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH 1 id=3810871 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_1280_15
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

11564..11959
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Zea mays RepID=C4J347_MAIZE
similar to 280aa long hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
similar to 280aa long hypothetical protein
13_1_40cm_4_scaffold_1280_16
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(12354..13736)
DNA (1383bp) protein (461aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RBG_16_Chloroflexi_64_32_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=TILS_SYMTH
cell cycle protein
13_1_40cm_4_scaffold_1280_trna_2
unknown

Not on your lists

comp(13741..13813)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1280_trna_1
unknown

Not on your lists

comp(14606..14677)
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_1280_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14713..15018)
DNA (306bp) protein (102aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1280_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15120..15929)
DNA (810bp) protein (270aa)
Beta-lactamase (EC:3.5.2.6) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036881EB
beta-lactamase
13_1_40cm_4_scaffold_1280_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15996..16916
DNA (921bp) protein (307aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EIR3_AMYSD
family 3 extracellular solute-binding protein; K10005 glutamate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1280_20
unknown

Not on your lists

16954..17208
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_4_scaffold_1280_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17145..18044)
DNA (900bp) protein (300aa)
PfkB domain protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC15_THET1
PfkB domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PfkB domain-containing protein
13_1_40cm_4_scaffold_1280_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(18037..18537)
DNA (501bp) protein (167aa)
GTP-binding protein YchF n=1 Tax=Cohnella laeviribosi RepID=UPI00037F2010
GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ychF; GTP-dependent nucleic acid-binding protein EngD
13_1_40cm_4_scaffold_1280_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19133..19402)
DNA (270bp) protein (90aa)
Glutamate racemase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MA22_PARUW
glutamate racemase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
murI; glutamate racemase
Displaying 25 items

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