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13_1_40cm_4_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_127_1
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7..1494)
DNA (1488bp) protein (496aa)
Ig domain protein group 2 domain protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PM33_MEIRD
Ig domain-containing protein
Ig domain-containing protein {ECO:0000313|EMBL:AGK03597.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATC
13_1_40cm_4_scaffold_127_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1533..2162
DNA (630bp) protein (210aa)
Alternative protein DSPP n=1 Tax=Homo sapiens RepID=L8E9K9_HUMAN
cell wall surface anchor family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_127_3
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3525..3974
DNA (450bp) protein (150aa)
formyl transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8E05
hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO45443.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
13_1_40cm_4_scaffold_127_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3946..4779
DNA (834bp) protein (278aa)
Polysaccharide deacetylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NR5_SOLUE
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABJ88705.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usit
13_1_40cm_4_scaffold_127_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4730..5458)
DNA (729bp) protein (243aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH37627.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH37627.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimon
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W7_GEMAT
13_1_40cm_4_scaffold_127_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5875..6972
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIH4_TERRK
Methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:AHG90004.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_127_7
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6969..8237
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT302 RepID=UPI0003779ABE
Uncharacterized protein {ECO:0000313|EMBL:EST24246.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
13_1_40cm_4_scaffold_127_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(8195..8998)
DNA (804bp) protein (268aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
13_1_40cm_4_scaffold_127_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9019..10620)
DNA (1602bp) protein (534aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:AHG90036.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_127_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10928..13372
DNA (2445bp) protein (815aa)
Putative exopolysaccharide biosynthesis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W1_GEMAT
putative exopolysaccharide biosynthesis protein
Putative exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAH37621.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimon
13_1_40cm_4_scaffold_127_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13369..14328)
DNA (960bp) protein (320aa)
Response regulator/GGDEF domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPM4_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90034.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_127_12
unknown

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14644..14865
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_127_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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14869..16695
DNA (1827bp) protein (609aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
13_1_40cm_4_scaffold_127_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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16700..17335
DNA (636bp) protein (212aa)
Periplasmic polysaccharide biosynthesis/export protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJS2_GEOSK
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
polysaccharide export protein
13_1_40cm_4_scaffold_127_15
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

17340..18506
DNA (1167bp) protein (389aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Schlesneria paludicola RepID=UPI00029B1174
13_1_40cm_4_scaffold_127_16
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18795..19535
DNA (741bp) protein (247aa)
Anti-sigma-factor antagonist id=4337253 bin=GWC2_Ignavibacteria_56_12 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anti-sigma-factor antagonist
13_1_40cm_4_scaffold_127_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19532..19657
DNA (126bp) protein (42aa)
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Anti-sigma-factor antagonist id=4337253 bin=GWC2_Ignavibacteria_56_12 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
rsbR; positive sigma factor regulator
13_1_40cm_4_scaffold_127_18
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19689..20081
DNA (393bp) protein (131aa)
Antagonist protein RsbS id=4337252 bin=GWC2_Ignavibacteria_56_12 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
rsbS; putative sigma activity regulator RsbS
13_1_40cm_4_scaffold_127_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20074..20484
DNA (411bp) protein (137aa)
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:KCZ71458.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae;
Putative anti-sigma regulatory factor, serine/threonine protein kinase id=4927123 bin=GWA2_Ignavibacteria_55_11 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
anti-sigma regulatory factor, serine/threonine protein kinase
13_1_40cm_4_scaffold_127_20
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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20477..21118
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003683974
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
protein serine/threonine phosphatase
13_1_40cm_4_scaffold_127_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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21115..22533
DNA (1419bp) protein (473aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2304889 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_4_scaffold_127_22
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22530..23822
DNA (1293bp) protein (431aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=4 Tax=Burkholderia RepID=A0KE50_BURCH id=5225201 bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:KFN51597.1}; Flags: Fragment;; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="
hypothetical protein
13_1_40cm_4_scaffold_127_23
unknown

Not on your lists

comp(23830..24021)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_127_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(24087..24971)
DNA (885bp) protein (295aa)
Amidinotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5E8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_4_scaffold_127_25
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25047..26690
DNA (1644bp) protein (548aa)
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT
Amidotransferase-related protein {ECO:0000313|EMBL:EPX63455.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" s
gatA2; amidase
13_1_40cm_4_scaffold_127_26
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(26682..27965)
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT75_RUBXD
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABG05403.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" so
13_1_40cm_4_scaffold_127_27
CSP1_5_NC10, NC10, Bacteria

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comp(27958..28548)
DNA (591bp) protein (197aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] id=14431486 bin=bin3_NC10 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=CSP1_5_NC10
tag; 3-methyladenine DNA glycosylase
13_1_40cm_4_scaffold_127_28
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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28626..29585
DNA (960bp) protein (320aa)
Quinone oxidoreductase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U1B8_9RHOB
Quinone oxidoreductase {ECO:0000313|EMBL:EAQ02101.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis
Zn-dependant oxidoreductase
13_1_40cm_4_scaffold_127_29
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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29602..30768
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39N69_BURS3
conserved protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CEG59969.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legione
13_1_40cm_4_scaffold_127_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30804..31577
DNA (774bp) protein (258aa)
hypothetical protein; K00540 [EC:1.-.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZIC0_NODSP
hypothetical protein
Displaying items 1-30 of 40 in total

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