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13_1_40cm_4_scaffold_1274

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1274_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(2..871)
DNA (870bp) protein (290aa)
Rhs family protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S024_9BURK
Teneurin-3 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Teneurin-3
13_1_40cm_4_scaffold_1274_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1116..1574)
DNA (459bp) protein (153aa)
id=3047192 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=4870785 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_1274_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1651..3066)
DNA (1416bp) protein (472aa)
Putative membrane associated protease {ECO:0000313|EMBL:KFE67641.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;
abortive infection protein
Membrane-associated zinc metalloprotease id=4831197 bin=GWA2_Deltaproteo_65_63 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_1274_4
unknown

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3278..3982
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4425..5618)
DNA (1194bp) protein (398aa)
Multi-sensor signal transduction histidine kinase id=3564564 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
PAS/PAC sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_1274_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5615..6964)
DNA (1350bp) protein (450aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator id=14626361 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_40cm_4_scaffold_1274_7
unknown

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7205..7420
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_8
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7567..8316
DNA (750bp) protein (250aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0F5_GEODF
flagellar basal-body rod protein FlgF
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:ACM18992.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
13_1_40cm_4_scaffold_1274_9
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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8326..8634
DNA (309bp) protein (103aa)
Flagellar P-ring protein id=3345908 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
flgI; flagellar basal body P-ring protein; K02394 flagellar P-ring protein precursor FlgI Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
flgI; flagellar basal body P-ring protein
13_1_40cm_4_scaffold_1274_10
unknown

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8634..8831
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_11
unknown

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8828..8920
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9018..9314
DNA (297bp) protein (99aa)
Anti-sigma-28 factor, FlgM family {ECO:0000313|EMBL:CDM64912.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anti-sigma-28 factor FlgM; K02398 negative regulator of flagellin synthesis FlgM
13_1_40cm_4_scaffold_1274_13
unknown

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9339..9803
DNA (465bp) protein (155aa)
hypothetical protein
13_1_40cm_4_scaffold_1274_14
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9979..10896
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003639DA6
flgL; flagellar hook-associated protein FlgL; K02397 flagellar hook-associated protein 3 FlgL Tax=CG_Solirubrobact_01
flagellar hook-associated protein 3
13_1_40cm_4_scaffold_1274_15
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10893..11330
DNA (438bp) protein (146aa)
Flagellar assembly factor FliW n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2S4_9BACT
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;
hypothetical protein
13_1_40cm_4_scaffold_1274_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11817..13733
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGF9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68840.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_4_scaffold_1274_17
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13733..14008
DNA (276bp) protein (92aa)
Oxidoreductase domain protein n=2 Tax=Chloroflexus RepID=A9WBP1_CHLAA
Oxidoreductase {ECO:0000313|EMBL:KIF19885.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_1274_18
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14008..14658
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D30A6
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABY34848.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloro
13_1_40cm_4_scaffold_1274_19
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

14670..15041
DNA (372bp) protein (124aa)
Transferase hexapeptide repeat containing protein id=4361901 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hexapaptide repeat-containing transferase Tax=GWF2_Lentisphaerae_57_35_curated
hexapaptide repeat-containing transferase
13_1_40cm_4_scaffold_1274_20
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

15148..16248
DNA (1101bp) protein (367aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ACZ43694.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ACZ43694.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (stra
Glutamine--scyllo-inositol transaminase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIX4_THET1
13_1_40cm_4_scaffold_1274_21
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

16245..17234
DNA (990bp) protein (330aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00031B787B
NAD-dependent epimerase {ECO:0000313|EMBL:KIY10845.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
13_1_40cm_4_scaffold_1274_22
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17231..18007
DNA (777bp) protein (259aa)
hypothetical protein Tax=RBG_13_Planctomycetes_63_9_curated
Methyltransferase type 11 id=3521225 bin=GWA2_CPR4_42_17 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
type 11 methyltransferase
13_1_40cm_4_scaffold_1274_23
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

18007..18606
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E28B1C
acetyltransferase Tax=GWF2_Nitrospirae_44_13_curated
acetyltransferase
13_1_40cm_4_scaffold_1274_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18603..19643
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B140D
hypothetical protein
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AGA26766.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetace
13_1_40cm_4_scaffold_1274_25
unknown

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19702..19836
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20288..21604
DNA (1317bp) protein (439aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
PAS/PAC sensor hybrid histidine kinase id=4905361 bin=GWA2_Methylomirabilis_73_35 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_1274_27
unknown

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comp(21753..22028)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_28
unknown

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comp(22028..22498)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_29
unknown

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comp(22495..22662)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_1274_30
unknown

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comp(22662..23219)
DNA (558bp) protein (186aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

View Taxonomy