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13_1_40cm_4_scaffold_1290

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1290_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1..192
DNA (192bp) protein (64aa)
myo-inosose-2 dehydratase (EC:4.2.1.44)
Myo-inosose-2 dehydratase {ECO:0000313|EMBL:ACZ91138.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ACZ91138.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptos
Myo-inosose-2 dehydratase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2B2_STRRD
13_1_40cm_4_scaffold_1290_2
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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203..1129
DNA (927bp) protein (309aa)
Aminoimidazole riboside kinase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LRE9_9ACTO
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KHD75318.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
iolC; aminoimidazole riboside kinase
13_1_40cm_4_scaffold_1290_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1141..2979
DNA (1839bp) protein (613aa)
Thiamine pyrophosphate enzyme, central region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVA0_RUBXD
thiamine pyrophosphate enzyme, central region
Thiamine pyrophosphate enzyme, central region {ECO:0000313|EMBL:ABG04678.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubroba
13_1_40cm_4_scaffold_1290_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2976..3764
DNA (789bp) protein (263aa)
Myo-inositol catabolism IolB region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVA1_RUBXD
myo-inositol catabolism IolB region
Myo-inositol catabolism IolB region {ECO:0000313|EMBL:ABG04677.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" so
13_1_40cm_4_scaffold_1290_5
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3761..4423
DNA (663bp) protein (221aa)
haloacid dehalogenase n=1 Tax=Salinispora pacifica RepID=UPI0003677994
HAD-superfamily hydrolase, subfamily IA {ECO:0000313|EMBL:EEP69704.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora s
HAD superfamily hydrolase
13_1_40cm_4_scaffold_1290_trna_1
unknown

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4437..4508
DNA (72bp)
transferRNA
13_1_40cm_4_scaffold_1290_6
unknown

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5108..5335
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_1290_trna_2
unknown

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5587..5659
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1290_7
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(5664..6227)
DNA (564bp) protein (188aa)
Methyltransferase type 11 n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SQ47_9CHLR
hypothetical protein Tax=CG_Anaero_04
type 11 methyltransferase
13_1_40cm_4_scaffold_1290_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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6329..7327
DNA (999bp) protein (333aa)
ATPase AAA n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLW1_SORCE
AAA ATPase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ATPase AAA
13_1_40cm_4_scaffold_1290_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7329..8237
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XZ06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_1290_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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8237..9205
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T912_9BACE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_1290_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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9202..10179
DNA (978bp) protein (326aa)
von Willebrand factor type A domain protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCF5_SALRM
von Willebrand factor type A; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
von Willebrand factor type A domain-containing protein
13_1_40cm_4_scaffold_1290_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10176..11966
DNA (1791bp) protein (597aa)
BatB protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MSF3_9BACT
hypothetical protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
von Willebrand factor type A
13_1_40cm_4_scaffold_1290_13
unknown

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12024..12644
DNA (621bp) protein (207aa)

This feature has no annotations

13_1_40cm_4_scaffold_1290_14
unknown

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comp(12649..12876)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_1290_15
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12959..13624)
DNA (666bp) protein (222aa)
PAS domain S-box n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TBS0_9CYAN
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFY80307.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
13_1_40cm_4_scaffold_1290_16
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13735..14037)
DNA (303bp) protein (101aa)
diguanylate cyclase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003490C06
Diguanylate cyclase {ECO:0000313|EMBL:KEA61260.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" s
diguanylate kinase
13_1_40cm_4_scaffold_1290_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14625..15401)
DNA (777bp) protein (259aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative uncharacterized protein id=4677569 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_1290_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15448..16206)
DNA (759bp) protein (253aa)
prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Prephenate dehydratase n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZR95_THETH
prephenate dehydratase
13_1_40cm_4_scaffold_1290_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17465..17830
DNA (366bp) protein (122aa)
hypothetical protein id=1245253 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1290_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17827..19014
DNA (1188bp) protein (396aa)
Selenocysteine lyase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GVC9_9EURY
selenocysteine lyase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
aminotransferase class V
13_1_40cm_4_scaffold_1290_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

19014..19802
DNA (789bp) protein (263aa)
Putative oxidoreductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7H1_CALAS
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
putative oxidoreductase
13_1_40cm_4_scaffold_1290_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19830..19988)
DNA (159bp) protein (53aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 24 items

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