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13_1_40cm_4_scaffold_13187

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_13187_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

27..554
DNA (528bp) protein (176aa)
Transcription factor E n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9K2_9ARCH
transcription factor Tax=RBG_13_Bathyarchaeota_38_9_curated
transcription factor
13_1_40cm_4_scaffold_13187_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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579..1400
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDD6_THEKO
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_4_scaffold_13187_3
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(1753..3012)
DNA (1260bp) protein (420aa)
Formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:ABO07643.1}; EC=2.8.3.16 {ECO:0000313|EMBL:ABO07643.1};; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobac
Formyl-CoA transferase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MSM6_PYRCJ
13_1_40cm_4_scaffold_13187_4
unknown

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3015..3575
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_5
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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3589..3921
DNA (333bp) protein (111aa)
hypothetical protein; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_13_Bathyarchaeota_52_12_curated
Bacterial lipoate protein ligase C-terminus n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BWS9_ANAMD
Bacterial lipoate protein ligase C-terminus
13_1_40cm_4_scaffold_13187_6
unknown

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comp(4203..4403)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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4453..4680
DNA (228bp) protein (76aa)
Biotin/lipoate A/B protein ligase family protein; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
putative lipoate-protein ligase A; K03800 lipoate-protein ligase A [EC:2.7.7.63]
13_1_40cm_4_scaffold_13187_8
unknown

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comp(4722..4943)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_9
unknown

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comp(4943..5137)
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_10
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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5196..5531
DNA (336bp) protein (112aa)
Transcriptional regulator, AsnC family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAG3_ACIB4
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDY37045.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
13_1_40cm_4_scaffold_13187_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5533..6195
DNA (663bp) protein (221aa)
Transcriptional regulator, AsnC family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF61_9EURY
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Bathyarchaeota_46_16b_curated
transcriptional regulator, AsnC family
13_1_40cm_4_scaffold_13187_12
unknown

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6173..6280
DNA (108bp) protein (36aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_13
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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6391..7428
DNA (1038bp) protein (346aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus A
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVP4_9BACT
13_1_40cm_4_scaffold_13187_14
unknown

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comp(7478..8320)
DNA (843bp) protein (281aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_15

Not on your lists

comp(8317..8991)
DNA (675bp) protein (225aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAE5_METSL
Marine sediment metagenome DNA, contig: S01H4_C02006 {ECO:0000313|EMBL:GAG74387.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_4_scaffold_13187_16
unknown

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9205..10002
DNA (798bp) protein (266aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_17
unknown

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10002..10337
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10185..10622)
DNA (438bp) protein (146aa)
methylmalonyl-CoA mutase, small subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:AFU59422.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AFU59422.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; N
Methylmalonyl-CoA mutase, small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILC3_NITGG
13_1_40cm_4_scaffold_13187_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10790..11851
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1D9D7_9ZZZZ
nitrogenase subunit NifH (ATPase)-like protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_13187_20
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

11943..12530
DNA (588bp) protein (196aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8AB09_IGNH4
3-isopropylmalate dehydratase large subunit
13_1_40cm_4_scaffold_13187_21
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

12527..13183
DNA (657bp) protein (219aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8AB09_IGNH4
3-isopropylmalate dehydratase large subunit
13_1_40cm_4_scaffold_13187_22
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

13271..13705
DNA (435bp) protein (145aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8A985_IGNH4
3-isopropylmalate dehydratase small subunit
13_1_40cm_4_scaffold_13187_23
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(14137..15129)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0N5J4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKR73759.1}; TaxID=1618468 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_13187_24
unknown

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comp(15339..15551)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_25
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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16090..16506
DNA (417bp) protein (139aa)
drug/metabolite transporter (DMT) superfamily permease id=24577101 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGB13451.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
13_1_40cm_4_scaffold_13187_26
unknown

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16554..17024
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_13187_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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17507..18118
DNA (612bp) protein (204aa)
Protein GrpE n=2 Tax=Desulfitobacterium hafniense RepID=B8FUN5_DESHD
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RBG_16_Thaumarchaeota_49_8_curated
heat shock protein GrpE
13_1_40cm_4_scaffold_13187_28
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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19110..19952
DNA (843bp) protein (281aa)
Chaperone protein DnaK n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SNA5_9EURY
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=RBG_13_Bathyarchaeota_46_16b_curated
dnaK; molecular chaperone DnaK
13_1_40cm_4_scaffold_13187_29
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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19977..20756
DNA (780bp) protein (260aa)
Chaperone protein DnaJ n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQC7_METH6
chaperone protein DnaJ Tax=RBG_13_Bathyarchaeota_46_16b_curated
Chaperone protein DnaJ
Displaying 29 items

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