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13_1_40cm_4_scaffold_1320

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1320_1

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comp(2..160)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK98292.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_1320_2

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comp(239..1012)
DNA (774bp) protein (258aa)
Dihydroorotate dehydrogenase electron transfer subunit n=1 Tax=Dehalococcoides mccartyi GY50 RepID=V5QD05_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL52930.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydroorotate dehydrogenase
13_1_40cm_4_scaffold_1320_3
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(1009..4290)
DNA (3282bp) protein (1094aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_13_Chloroflexi_52_14_curated
dly:Dehly_0915 carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=1242245 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
carbamoyl phosphate synthase large subunit
13_1_40cm_4_scaffold_1320_4
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4328..4702
DNA (375bp) protein (125aa)
HEPN domain-containing protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G0J4_9DELT
HEPN domain protein Tax=RBG_16_Ignavibacteria_35_7_curated
13_1_40cm_4_scaffold_1320_5
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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4678..5019
DNA (342bp) protein (114aa)
DNA polymerase beta domain protein region id=4571485 bin=GWC2_Nitrospirae-rel_56_14 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA polymerase beta domain-containing protein Tax=GWC2_Nitrospirae_56_14_curated
DNA polymerase beta domain-containing protein
13_1_40cm_4_scaffold_1320_6

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comp(5108..5587)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK68931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_1320_7
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(5587..6690)
DNA (1104bp) protein (368aa)
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5) Tax=RBG_16_Chloroflexi_64_32_curated
dly:Dehly_0914 carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=1242244 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
13_1_40cm_4_scaffold_1320_8
unknown

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comp(6680..6964)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_1320_9

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comp(7126..8427)
DNA (1302bp) protein (434aa)
det:DET1200 pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] id=1242243 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Uncharacterized protein {ECO:0000313|EMBL:KKL09021.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_1320_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(8424..9461)
DNA (1038bp) protein (346aa)
aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RBG_16_Chloroflexi_64_32_curated
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0T6_DEHLB
13_1_40cm_4_scaffold_1320_11
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(9458..10060)
DNA (603bp) protein (201aa)
uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RBG_16_Chloroflexi_64_32_curated
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=2 Tax=Dehalococcoides mccartyi RepID=PYRR_DEHE1
13_1_40cm_4_scaffold_1320_12
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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10252..10563
DNA (312bp) protein (104aa)
Rieske (2Fe-2S) domain-containing protein; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=RBG_16_Chloroflexi_64_32_curated
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
dioxygenase, ferredoxin subunit
13_1_40cm_4_scaffold_1320_13

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comp(10605..11678)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4T4_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KKM25725.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_1320_14

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comp(11657..12079)
DNA (423bp) protein (141aa)
Ferric uptake regulator, Fur family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKL3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL18096.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ferric uptake regulator, Fur family
13_1_40cm_4_scaffold_1320_15
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12198..12629)
DNA (432bp) protein (144aa)
short-chain dehydrogenase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4DB60
Short-chain dehydrogenase {ECO:0000313|EMBL:KDE99166.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS
short-chain dehydrogenase of unknown substrate specificity
13_1_40cm_4_scaffold_1320_16
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12695..12949)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IZ76_MYCSM
short-chain dehydrogenase of unknown substrate specificity
Uncharacterized protein {ECO:0000313|EMBL:AGB23913.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
13_1_40cm_4_scaffold_1320_17
unknown

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comp(13042..13155)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_4_scaffold_1320_18

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comp(13417..14688)
DNA (1272bp) protein (424aa)
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML31_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN04513.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_1320_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(14714..15145)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFG6_ANADF
Putative ester cyclase {ECO:0000313|EMBL:KCZ70593.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" s
hypothetical protein
13_1_40cm_4_scaffold_1320_20
R_NC10_66_22, NC10, Bacteria

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comp(15189..16991)
DNA (1803bp) protein (601aa)
aor; Tungsten-containing aldehyde ferredoxin oxidoreductase (EC:1.2.7.5) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
aor; Tungsten-containing aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Tungsten-containing aldehyde ferredoxin oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML28_9BACT
13_1_40cm_4_scaffold_1320_21
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(17016..17474)
DNA (459bp) protein (153aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0E3_9BACT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EFQ22962.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Ami
4Fe-4S ferredoxin iron-sulfur binding domain protein
13_1_40cm_4_scaffold_1320_22
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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17878..18702
DNA (825bp) protein (275aa)
3-oxoadipate enol-lactonase; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24] Tax=RBG_16_Chloroflexi_64_32_curated
Esterase n=1 Tax=Geobacillus sp. JF8 RepID=S5ZFT1_9BACI
esterase
13_1_40cm_4_scaffold_1320_23
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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18744..18926
DNA (183bp) protein (61aa)
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1320_24
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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18926..19141
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1P6_CONWI
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1320_25

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19312..19740
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM20813.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=14631049 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_1320_26
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(19781..20473)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00031AA77B
putative dehydrogenase Tax=RBG_16_Chloroflexi_64_32_curated
FAD dependent oxidoreductase
Displaying 26 items

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