ggKbase home page

13_1_40cm_4_scaffold_138

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_138_1
unknown

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_2
unknown

Not on your lists

comp(458..847)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_3
unknown

Not on your lists

comp(1142..1426)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_4
unknown

Not on your lists

1551..1958
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_5
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(1980..2384)
DNA (405bp) protein (135aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_4_scaffold_138_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(2375..2599)
DNA (225bp) protein (75aa)
AbrB family transcriptional regulator protein Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_1_40cm_4_scaffold_138_7
unknown

Not on your lists

comp(2956..3258)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_8
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(3681..5495)
DNA (1815bp) protein (605aa)
Predicted hydrolases or acyltransferases Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
13_1_40cm_4_scaffold_138_9
unknown

Not on your lists

comp(5585..5881)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_10
unknown

Not on your lists

comp(5881..6108)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

6376..6804
DNA (429bp) protein (143aa)
source missing description 7..119 id=1245680 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
source missing description 7..119 Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_138_12
unknown

Not on your lists

comp(6910..7389)
DNA (480bp) protein (160aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_13
unknown

Not on your lists

7650..8009
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8492..9295
DNA (804bp) protein (268aa)
plastocyanin
Plastocyanin {ECO:0000313|EMBL:AIF83724.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera
13_1_40cm_4_scaffold_138_15
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

9473..9892
DNA (420bp) protein (140aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_4_scaffold_138_16
unknown

Not on your lists

comp(10182..10448)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_17
unknown

Not on your lists

comp(10508..10861)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_18
unknown

Not on your lists

comp(11490..11651)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_19
unknown

Not on your lists

12027..12911
DNA (885bp) protein (295aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_20
unknown

Not on your lists

13348..14661
DNA (1314bp) protein (438aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_21
unknown

Not on your lists

14773..15303
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_22
unknown

Not on your lists

15964..16515
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_4_scaffold_138_23
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(16561..17796)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000371BA43
Family 2 glycosyl transferase {ECO:0000313|EMBL:EWG07444.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;
glycosyl transferase family protein
13_1_40cm_4_scaffold_138_24
unknown

Not on your lists

17873..19186
DNA (1314bp) protein (438aa)
hypothetical protein
13_1_40cm_4_scaffold_138_25
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19775..20203)
DNA (429bp) protein (143aa)
UPF0292 protein MTH_890 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=Y890_METTH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_138_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20252..21208)
DNA (957bp) protein (319aa)
tyrosyl-tRNA ligase (EC:6.1.1.1) Tax=RBG_16_Archaea_50_20_curated
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5H3_9EURY
13_1_40cm_4_scaffold_138_27
unknown

Not on your lists

comp(21759..22316)
DNA (558bp) protein (186aa)

This feature has no annotations

Displaying 27 items

View Taxonomy