name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_1380_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(1..372)
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hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=3919813 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1380_trna_2
unknown
|
Not on your lists |
comp(472..544)
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transferRNA
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13_1_40cm_4_scaffold_1380_trna_1
unknown
|
Not on your lists |
comp(581..652)
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transferRNA
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13_1_40cm_4_scaffold_1380_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(678..1676)
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galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=GWA2_Rokubacteria_73_35_curated
Galactose-1-phosphate uridylyltransferase id=3919817 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
galactose-1-phosphate uridylyltransferase
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13_1_40cm_4_scaffold_1380_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(1681..2670)
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gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWA2_Rokubacteria_73_35_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=3919822 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
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13_1_40cm_4_scaffold_1380_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(2667..3281)
|
Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycerol-3-phosphate acyltransferase id=3919825 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glycerol-3-phosphate acyltransferase
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13_1_40cm_4_scaffold_1380_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(3278..3847)
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pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=3919891 bin=GWA2_Methylomirabilis_73_35 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1380_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(3885..4622)
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2-phosphosulfolactate phosphatase (EC:3.1.3.71); K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=GWA2_Rokubacteria_73_35_curated
Probable 2-phosphosulfolactate phosphatase id=3919892 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-phosphosulfolactate phosphatase
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13_1_40cm_4_scaffold_1380_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(4638..5846)
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argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5)
Argininosuccinate synthase id=4819282 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
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13_1_40cm_4_scaffold_1380_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(5836..6708)
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argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase id=3919894 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1380_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6711..7904)
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argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) id=14626235 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11)
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13_1_40cm_4_scaffold_1380_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(7916..8788)
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acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=3919897 bin=GWA2_Methylomirabilis_73_35 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1380_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(8870..10027)
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hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein Tax=GWA2_Rokubacteria_73_35_curated
ATP-dependent protease ATPase subunit HslU id=3919900 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein
|
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13_1_40cm_4_scaffold_1380_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(10357..10917)
|
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent protease subunit HslV id=4765391 bin=GWC2_Methylomirabilis_70_24 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ATP-dependent protease peptidase subunit
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13_1_40cm_4_scaffold_1380_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(10976..11281)
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PfpI family intracellular peptidase; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
site-specific recombinase, XerC; K03733 integrase/recombinase XerC id=14626231 bin=bin7_NC10_sister species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phage integrase family protein
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13_1_40cm_4_scaffold_1380_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(11813..12481)
|
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=GWA2_Rokubacteria_73_35_curated
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase id=3919910 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1380_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(12478..13998)
|
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA topoisomerase id=3919910 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA topoisomerase I
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13_1_40cm_4_scaffold_1380_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(13999..14892)
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DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA processing chain A (DprA/Smf) id=3806661 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA protecting protein DprA
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13_1_40cm_4_scaffold_1380_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(14972..15847)
|
TPR repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tetratricopeptide domain-containing protein id=14626228 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
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|
13_1_40cm_4_scaffold_1380_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(15889..17028)
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molybdenum cofactor synthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWA2_Rokubacteria_73_35_curated
Molybdenum cofactor synthesis domain protein id=3806663 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdenum cofactor synthesis domain-containing protein
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13_1_40cm_4_scaffold_1380_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(17283..18392)
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MopC id=3806664 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mopC; protein MopC Tax=GWA2_Rokubacteria_73_35_curated
mopC; protein MopC
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13_1_40cm_4_scaffold_1380_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(18389..18895)
|
putative uncharacterized protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alcohol dehydrogenase large subunit id=3806665 bin=GWA2_Methylomirabilis_73_35 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1380_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(18906..19442)
|
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical membrane protein id=3806666 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein of unknown function DUF3341
|
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13_1_40cm_4_scaffold_1380_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(19432..20589)
|
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=14626218 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
|
|
13_1_40cm_4_scaffold_1380_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(20755..23655)
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molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=14626217 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
molybdopterin oxidoreductase Fe4S4 region
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13_1_40cm_4_scaffold_1380_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(23784..24377)
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hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3942769 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
|
13_1_40cm_4_scaffold_1380_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(24581..25858)
|
glutamate-1-semialdehyde-2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWA2_Rokubacteria_73_35_curated
Glutamate-1-semialdehyde 2,1-aminomutase id=3942770 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamate-1-semialdehyde-2,1-aminomutase
|
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13_1_40cm_4_scaffold_1380_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(25860..26399)
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Putative Mov34/MPN/PAD-1 family protein id=3942771 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Mov34/MPN/PAD-1 family protein Tax=GWA2_Rokubacteria_73_35_curated
Mov34/MPN/PAD-1 family protein
|
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13_1_40cm_4_scaffold_1380_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
comp(26396..26695)
|
hypothetical protein; K03636 molybdopterin synthase sulfur carrier subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative Molybdopterin biosynthesis protein moeB (Modular protein) id=3942772 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
|
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13_1_40cm_4_scaffold_1380_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(26698..27621)
|
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cysK; pyridoxal-phosphate (PLP) dependent enzymes family; subunit of cysteine synthase A (O-acetylserine sulfhydrolase A) (EC:2.5.1.47)
Cysteine synthase id=3942773 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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