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13_1_40cm_4_scaffold_1392

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1392_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2..154)
DNA (153bp) protein (51aa)
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member id=4165967 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
13_1_40cm_4_scaffold_1392_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

168..980
DNA (813bp) protein (271aa)
Thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thioesterase superfamily protein id=5020384 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1392_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1179..2021)
DNA (843bp) protein (281aa)
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14626572 bin=bin7_NC10_sister species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
dienelactone hydrolase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=CSP1_6_Rokubacteria
dienelactone hydrolase
13_1_40cm_4_scaffold_1392_4
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2030..3334)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBX6_9BRAD
conserved exported hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM91373.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
13_1_40cm_4_scaffold_1392_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3338..3718)
DNA (381bp) protein (127aa)
ArsC family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ArsC family protein id=5020381 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsenate reductase like protein
13_1_40cm_4_scaffold_1392_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3762..4592)
DNA (831bp) protein (277aa)
PHP domain protein id=5020380 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PHP domain-containing protein; K07053 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PHP domain-containing protein
13_1_40cm_4_scaffold_1392_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4589..6067)
DNA (1479bp) protein (493aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pepA; leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=5020379 bin=GWA2_Methylomirabilis_73_35 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1392_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6064..6501)
DNA (438bp) protein (146aa)
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX family hydrolase id=5020378 bin=GWA2_Methylomirabilis_73_35 species=Thermoproteus tenax genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_1_40cm_4_scaffold_1392_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6498..7313)
DNA (816bp) protein (272aa)
lipoate protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Octanoyltransferase LipM id=5020377 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
biotin/lipoate A/B protein ligase
13_1_40cm_4_scaffold_1392_10
Ovis aries, Ovis, Mammalia, Chordata, Metazoa

Not on your lists

7459..8379
DNA (921bp) protein (307aa)
beta-ketoacyl synthase n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000362781F
Uncharacterized protein {ECO:0000313|Ensembl:ENSOARP00000020801}; Flags: Fragment;; TaxID=9940 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiath
hypothetical protein
13_1_40cm_4_scaffold_1392_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8447..9193)
DNA (747bp) protein (249aa)
Taurine-transporting AtPase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XKD1_9EURY
Taurine-transporting AtPase {ECO:0000313|EMBL:ELY62195.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innerm
ABC-transporter ATP-binding component
13_1_40cm_4_scaffold_1392_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9207..9965)
DNA (759bp) protein (253aa)
Binding-protein-dependent transporter inner membrane component n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XLB5_9EURY
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Sulfonate/nitrate/taurine transport system permease
13_1_40cm_4_scaffold_1392_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9973..10935)
DNA (963bp) protein (321aa)
ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GI5_BURXL
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61503.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
bacterial extracellular solute-binding s, 3 family protein
13_1_40cm_4_scaffold_1392_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10932..11564)
DNA (633bp) protein (211aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] id=14625736 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
1-hydroxy-2-naphthoate dioxygenase (EC:1.13.11.38)
13_1_40cm_4_scaffold_1392_15
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11890..13077)
DNA (1188bp) protein (396aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TRS1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETX07255.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TIM-barrel fold metal-dependent hydrolase
13_1_40cm_4_scaffold_1392_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13092..13847)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U6A3_OCEP5
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1392_17
unknown

Not on your lists

14043..14264
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_1392_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14218..14523)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPX9_9CLOT
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_40cm_4_scaffold_1392_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14520..14951)
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_40cm_4_scaffold_1392_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14948..15907)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GHF0_9GAMM
putative BUG-like extracytoplasmic solute binding receptor, TTT family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
bug; extra-cytoplasmic solute receptor protein
13_1_40cm_4_scaffold_1392_21
unknown

Not on your lists

15973..16281
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_1392_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16394..17671)
DNA (1278bp) protein (426aa)
TRAP-type C4-dicarboxylate transport system, large permease component id=4555514 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP-type C4-dicarboxylate transport system, large permease component Tax=GWC2_Rokubacteria_70_16_curated
C4-dicarboxylate transport system permease large protein
13_1_40cm_4_scaffold_1392_23
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17668..18105)
DNA (438bp) protein (146aa)
TrapT dctQ-M fusion permease, dicarboxylate transport n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T5S8_ALCXX
tripartite AtP-independent periplasmic transporter subunit DctQ Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
putative gluconate TRAP family transporter, DctM subunit
13_1_40cm_4_scaffold_1392_24
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18108..18653)
DNA (546bp) protein (182aa)
Phosphoribosylaminoimidazole synthetase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FSE1_9RHOB
periplasmic substrate-binding transport protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
C4-dicarboxylate transport system (C4-dicarboxylate-binding protein)
13_1_40cm_4_scaffold_1392_25
unknown

Not on your lists

19143..19379
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 25 items

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