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13_1_40cm_4_scaffold_14084

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_14084_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1..357)
DNA (357bp) protein (119aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T70_SOLUE
13_1_40cm_4_scaffold_14084_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(483..743)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T8_GEMAT
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_14084_3
unknown

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comp(694..1104)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_14084_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1196..2278
DNA (1083bp) protein (361aa)
translation initiation factor 2B subunit I; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Methylthioribose-1-phosphate isomerase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=MTNA_PELTS
translation initiation factor 2B subunit
13_1_40cm_4_scaffold_14084_5

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2275..2745
DNA (471bp) protein (157aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56050.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
13_1_40cm_4_scaffold_14084_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2753..3157
DNA (405bp) protein (135aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
ccmE; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CcmE/CycJ protein
13_1_40cm_4_scaffold_14084_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3158..5182
DNA (2025bp) protein (675aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K2_GEMAT
ccmF; cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_4_scaffold_14084_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5179..5802
DNA (624bp) protein (208aa)
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome C biogenesis protein
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH id=14630971 bin=bin9_gal15 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin9_gal15 organism_group=GAL15
13_1_40cm_4_scaffold_14084_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5808..6329
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_14084_10
CSP1_5_NC10, NC10, Bacteria

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6451..7179
DNA (729bp) protein (243aa)
response regulator id=14429259 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
response regulator Tax=CSP1_5_NC10
two component LuxR family transcriptional regulator
13_1_40cm_4_scaffold_14084_11
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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7381..8442
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B1X4_9ALTE
Mg-chelatase subunit ChlD
Uncharacterized protein {ECO:0000313|EMBL:KGD62148.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
13_1_40cm_4_scaffold_14084_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8654..9481
DNA (828bp) protein (276aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_14084_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9605..10090
DNA (486bp) protein (162aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_14084_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10091..11041)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K7_GEMAT
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_14084_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11742..12521)
DNA (780bp) protein (260aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_14084_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12518..14053)
DNA (1536bp) protein (512aa)
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transglutaminase-like protein id=2535659 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative transglutaminase protein
13_1_40cm_4_scaffold_14084_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14050..14538)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J5ENK4_9MYCO
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_14084_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14535..15206)
DNA (672bp) protein (224aa)
TPR repeat-containing protein n=1 Tax=Arthrospira maxima CS-328 RepID=B5W7V6_ARTMA
SPY protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_14084_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15203..15526)
DNA (324bp) protein (108aa)
Divalent ion tolerance protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFI9_MYXSD id=5223137 bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Divalent-cation tolerance protein CutA; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CutA1 divalent ion tolerance protein
13_1_40cm_4_scaffold_14084_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15732..16811)
DNA (1080bp) protein (360aa)
Multidrug transport protein, mfs family n=2 Tax=Ralstonia solanacearum RepID=F6G476_RALS8
multidrug transport protein, mfs family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
multidrug transport protein, mfs family
13_1_40cm_4_scaffold_14084_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16974..17480)
DNA (507bp) protein (169aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9Q6_9ARCH
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_14084_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17571..18311
DNA (741bp) protein (247aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
13_1_40cm_4_scaffold_14084_23
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10, Candidatus Saccharibacteria, Bacteria

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18251..18484
DNA (234bp) protein (78aa)
excinuclease ABC subunit A n=1 Tax=Desulfospira joergensenii RepID=UPI0003B604FD
Excinuclease ABC, subunit A {ECO:0000313|EMBL:KKU19303.1}; TaxID=1619069 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10.;"
UvrABC system protein A
13_1_40cm_4_scaffold_14084_24
unknown

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18519..18827
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_14084_25
unknown

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19370..19579
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_4_scaffold_14084_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19607..20176
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L5_GEMAT
hypothetical protein; K03969 phage shock protein A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
Displaying 26 items

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