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13_1_40cm_4_scaffold_1483

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1483_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1..879
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJI9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89596.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_4_scaffold_1483_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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891..2189
-----------------
DNA (1299bp)
protein (433aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJI8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89595.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
twin-arginine translocation pathway signal protein
13_1_40cm_4_scaffold_1483_3
unknown

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2199..2411
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_1483_4
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2401..3222
-----------------
DNA (822bp)
protein (274aa)
ApbE family lipoprotein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1K7_VERMA
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:AEB45236.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
13_1_40cm_4_scaffold_1483_5
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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3219..3755
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0C929_9BACL
hypothetical protein Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
ferric reductase domain-containing transmembrane protein
13_1_40cm_4_scaffold_1483_6
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3766..5136)
-----------------
DNA (1371bp)
protein (457aa)
Protease prsW (EC:3.4.-.-)
Protease prsW n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3FWS7_9ACTO
Protease prsW {ECO:0000313|EMBL:EMF57480.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
13_1_40cm_4_scaffold_1483_7
unknown

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comp(5136..5624)
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

13_1_40cm_4_scaffold_1483_trna_3
unknown

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comp(5891..5973)
-----------------
DNA (83bp)
transferRNA
13_1_40cm_4_scaffold_1483_8
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(6106..8844)
-----------------
DNA (2739bp)
protein (913aa)
AAA ATPase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXE7_HERA2
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:ABX06867.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain A
13_1_40cm_4_scaffold_1483_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(8951..9904)
-----------------
DNA (954bp)
protein (318aa)
Acetamidase/Formamidase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIX5_ROSCS
acetamidase/formamidase
Acetamidase/Formamidase {ECO:0000313|EMBL:ABU57433.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus cas
13_1_40cm_4_scaffold_1483_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(9913..11556)
-----------------
DNA (1644bp)
protein (548aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKS0_9CHLR
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFH86370.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
13_1_40cm_4_scaffold_1483_11
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

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11639..12337
-----------------
DNA (699bp)
protein (233aa)
phosphotransferase domain-containing protein; K07053 Tax=RBG_13_Berkelbacteria_40_8_curated
phosphotransferase domain-containing protein; K07053 id=7201556 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
phosphotransferase domain-containing protein
13_1_40cm_4_scaffold_1483_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(12339..12761)
-----------------
DNA (423bp)
protein (141aa)
phage shock protein C Tax=RBG_16_Euryarchaeota_41_19_curated
13_1_40cm_4_scaffold_1483_trna_1
unknown

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12827..12899
-----------------
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1483_trna_2
unknown

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12943..13024
-----------------
DNA (82bp)
transferRNA
13_1_40cm_4_scaffold_1483_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13118..13342
-----------------
DNA (225bp)
protein (75aa)
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:AEL24614.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacter
ethyl tert-butyl ether degradation EthD
13_1_40cm_4_scaffold_1483_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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13381..13932
-----------------
DNA (552bp)
protein (184aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_RIF_CHLX_72_14_curated
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1245823 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
RNA polymerase ECF-type sigma factor
13_1_40cm_4_scaffold_1483_15
unknown

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13907..14197
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_1483_16
unknown

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comp(14204..15199)
-----------------
DNA (996bp)
protein (332aa)

This feature has no annotations

13_1_40cm_4_scaffold_1483_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(15232..16206)
-----------------
DNA (975bp)
protein (325aa)
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] id=14627425 bin=bin7_NC10_sister species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
ornithine cyclodeaminase (EC:4.3.1.12)
13_1_40cm_4_scaffold_1483_18
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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16209..17501
-----------------
DNA (1293bp)
protein (431aa)
deb:DehaBAV1_1016 homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=1241401 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RBG_16_Chloroflexi_58_8_curated
homoserine dehydrogenase
13_1_40cm_4_scaffold_1483_19
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17506..18549
-----------------
DNA (1044bp)
protein (348aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae
Threonine synthase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIX0_MOOTA
13_1_40cm_4_scaffold_1483_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18582..19394
-----------------
DNA (813bp)
protein (271aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3S6_SPHTD
homoserine kinase
13_1_40cm_4_scaffold_1483_21
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

19391..20602
-----------------
DNA (1212bp)
protein (404aa)
metL; aspartokinase (EC:2.7.2.4) Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BJW1_DEHSV
13_1_40cm_4_scaffold_1483_22
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

20607..20864
-----------------
DNA (258bp)
protein (86aa)
GTP-dependent nucleic acid-binding protein EngD {ECO:0000313|EMBL:AIE84833.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" sou
Displaying 25 items

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