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13_1_40cm_4_scaffold_1495

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1495_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..648)
DNA (648bp) protein (216aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1495_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(690..1268)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_1495_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1361..3103)
DNA (1743bp) protein (581aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_4_scaffold_1495_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3141..3842
DNA (702bp) protein (234aa)
High-affinity nickel-transporter protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F2_GEMAT
high-affinity nickel-transporter protein
High-affinity nickel-transporter protein {ECO:0000313|EMBL:BAH37462.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aura
13_1_40cm_4_scaffold_1495_5

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3846..4205
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM04429.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_4_scaffold_1495_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4241..5365)
DNA (1125bp) protein (375aa)
Glycosyl transferase, family 2 n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR04_9CHLB
glycosyl transferase family 2 protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glycosyl transferase family 2
13_1_40cm_4_scaffold_1495_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5362..6594)
DNA (1233bp) protein (411aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH92_RHOM4
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
sodium:dicarboxylate symporter
13_1_40cm_4_scaffold_1495_8
unknown

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6783..7088
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_1495_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7085..7669
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1495_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7814..8509
DNA (696bp) protein (232aa)
DtxR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
DtxR family transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
DtxR family transcriptional regulator
13_1_40cm_4_scaffold_1495_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

8506..9336
DNA (831bp) protein (277aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Uncharacterized protein id=3531829 bin=GWA1_Deltaproteobacteria_52_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
13_1_40cm_4_scaffold_1495_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9336..10697
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
mntH; putative manganese transport protein MntH; K03322 manganese transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Manganese transport protein mntH
13_1_40cm_4_scaffold_1495_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10697..11125
DNA (429bp) protein (143aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG91899.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1495_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11238..12188)
DNA (951bp) protein (317aa)
Putative hydroxlacyl-CoA dehydrogenase n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WH27_BORBR
hydroxlacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hydroxlacyl-CoA dehydrogenase
13_1_40cm_4_scaffold_1495_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12185..12619)
DNA (435bp) protein (145aa)
Inosine/uridine-preferring nucleoside hydrolase; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Purine nucleosidase, inosine-uridine preferring n=3 Tax=Lactobacillus plantarum RepID=M4KS86_LACPN
purine nucleosidase, inosine-uridine preferring
13_1_40cm_4_scaffold_1495_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13149..14198)
DNA (1050bp) protein (350aa)
resA; thiol-disulfide oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thiol-disulfide oxidoreductase id=4274239 bin=GWC2_Nitrospirae_57_13 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
redoxin domain-containing protein
13_1_40cm_4_scaffold_1495_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14528..14905)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371E48D
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1495_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15025..15387
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1495_19
Spongiibacter tropicus, Spongiibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15399..15869)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B75C66
13_1_40cm_4_scaffold_1495_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

15910..16290
DNA (381bp) protein (127aa)
Putative transcriptional regulator, ModE family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEL3_9BACT
ModE family transcriptional regulator
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:CBE68190.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabil
13_1_40cm_4_scaffold_1495_21
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

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16336..17277
DNA (942bp) protein (314aa)
Phosphate-selective outer membrane channel n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGB4_GEOBB
som; porin Tax=GWF2_Melainabacteria_32_7_curated
phosphate-selective porin
13_1_40cm_4_scaffold_1495_22
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17307..18152
DNA (846bp) protein (282aa)
ABC-type tungstate transport system, permease component n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4N6_PELTS
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68190.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
TupB; ABC-type tungstate transport system, permease component
13_1_40cm_4_scaffold_1495_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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18283..19497
DNA (1215bp) protein (405aa)
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_1495_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19537..20910
DNA (1374bp) protein (458aa)
Amino acid permease-associated region, putative n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJZ1_9CHRO
amino acid permease-associated protein; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative permease
13_1_40cm_4_scaffold_1495_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20942..22774
DNA (1833bp) protein (611aa)
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD+ synthetase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AY39_HERA2
NAD+ synthetase
13_1_40cm_4_scaffold_1495_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22774..23226
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
thioesterase superfamily protein
13_1_40cm_4_scaffold_1495_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23341..24147
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1495_28
unknown

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24178..24408
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_4_scaffold_1495_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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25036..25452
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A5E0E
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein of unknown function DUF2203
13_1_40cm_4_scaffold_1495_30
unknown

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25449..25844
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

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