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13_1_40cm_4_scaffold_1506

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1506_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..969
DNA (969bp) protein (323aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein id=14627589 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=CSP1_6_Rokubacteria
ABC-3 protein
13_1_40cm_4_scaffold_1506_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(908..1765)
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=14626066 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
3-hydroxybutyryl-CoA dehydrogenase
13_1_40cm_4_scaffold_1506_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1820..2137)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4741179 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1506_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2130..2654)
DNA (525bp) protein (175aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=GWA2_Rokubacteria_73_35_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase id=3474236 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1506_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2879..3259
DNA (381bp) protein (127aa)
hypothetical protein id=3474240 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_4_scaffold_1506_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3285..4037)
DNA (753bp) protein (251aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative hydrolase (HAD superfamily) id=3474242 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD family hydrolase
13_1_40cm_4_scaffold_1506_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4034..4801)
DNA (768bp) protein (256aa)
echA8_3; enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA dehydratase, EchA8_3 id=3474245 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1506_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4801..5118)
DNA (318bp) protein (106aa)
Rhodanese domain protein id=3474250 bin=GWA2_Methylomirabilis_73_35 species=Kingella denitrificans genus=Kingella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rhodanese-like protein Tax=GWA2_Rokubacteria_73_35_curated
sulfurtransferase
13_1_40cm_4_scaffold_1506_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5130..5981)
DNA (852bp) protein (284aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Alpha/beta hydrolase fold protein id=3474252 bin=GWA2_Methylomirabilis_73_35 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system
13_1_40cm_4_scaffold_1506_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6014..6961)
DNA (948bp) protein (316aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626058 bin=bin7_NC10_sister species=Thermus thermophilus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1506_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6964..8568)
DNA (1605bp) protein (535aa)
family 3 adenylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Family 3 adenylate cyclase id=4845186 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 3 adenylate cyclase
13_1_40cm_4_scaffold_1506_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8575..9411)
DNA (837bp) protein (279aa)
oxidoreductase id=14626050 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
oxidoreductase Tax=CSP1_6_Rokubacteria
putative oxidoreductase
13_1_40cm_4_scaffold_1506_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9921..10568
DNA (648bp) protein (216aa)
Soluble lytic murein transglycosylase-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Soluble lytic murein transglycosylase-like protein id=4894272 bin=GWA2_Methylomirabilis_73_35 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1506_14
unknown

Not on your lists

comp(10565..10870)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_4_scaffold_1506_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10867..11337)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBI8_9BRAD
thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thioesterase superfamily protein
13_1_40cm_4_scaffold_1506_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11351..11626)
DNA (276bp) protein (92aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAX6_THECD
transcriptional coactivator/pterin dehydratase
13_1_40cm_4_scaffold_1506_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11623..12189)
DNA (567bp) protein (189aa)
Mll1439 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KK1_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX26363.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
13_1_40cm_4_scaffold_1506_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12186..13109)
DNA (924bp) protein (308aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2995738 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NHL repeat family protein
13_1_40cm_4_scaffold_1506_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13165..15492
DNA (2328bp) protein (776aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=3162221 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_1506_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15468..15770)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cytochrome c, mono- and diheme variants family
13_1_40cm_4_scaffold_1506_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15760..16890)
DNA (1131bp) protein (377aa)
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein (EC:1.8.2.1); K05301 sulfite dehydrogenase [EC:1.8.2.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Sulfite oxidase-like oxidoreductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA91_SINAD
sulfite oxidase-like oxidoreductase
13_1_40cm_4_scaffold_1506_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16979..17437
DNA (459bp) protein (153aa)
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626943 bin=bin7_NC10_sister species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CSP1_6_Rokubacteria
RNA polymerase, sigma-24 subunit, ECF subfamily
13_1_40cm_4_scaffold_1506_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17442..18146
DNA (705bp) protein (235aa)
methylated-DNA--protein-cysteine methyltransferase id=14626944 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
methylated-DNA--protein-cysteine methyltransferase Tax=CSP1_6_Rokubacteria
methylated-DNA-(protein)-cysteine S-methyltransferase
13_1_40cm_4_scaffold_1506_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

18160..18951
DNA (792bp) protein (264aa)
amidohydrolase 2 id=14627726 bin=bin7_NC10_sister species=Ruegeria conchae genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
amidohydrolase 2 Tax=CSP1_6_Rokubacteria
amidohydrolase 2
Displaying 24 items

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