name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_1518_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(1..1284)
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miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=4853966 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(1378..3054)
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mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWA2_Rokubacteria_73_35_curated
DNA mismatch repair protein MutL id=4430852 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutL
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13_1_40cm_4_scaffold_1518_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(3079..5700)
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mutS; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA mismatch repair protein MutS id=4430853 bin=GWC2_Methylomirabilis_70_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutS
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13_1_40cm_4_scaffold_1518_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(5693..6175)
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histidine triad (HIT) protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine triad (HIT) protein id=3360718 bin=GWA2_Methylomirabilis_73_35 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine triad (HIT) protein
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13_1_40cm_4_scaffold_1518_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6210..6485)
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hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integration host factor, beta subunit, putative id=3360720 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hupA1; DNA-binding protein HU 1
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13_1_40cm_4_scaffold_1518_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6768..7688)
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peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] id=14627235 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26)
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13_1_40cm_4_scaffold_1518_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(7657..8478)
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rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
30S ribosomal protein S1 id=3360726 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsA; 30S ribosomal protein S1
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13_1_40cm_4_scaffold_1518_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(8475..9335)
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rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpsA; 30S ribosomal protein S1 id=14627234 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rpsA; 30S ribosomal protein S1
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13_1_40cm_4_scaffold_1518_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(9358..10716)
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cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytidylate kinase, partial n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4DB15
cytidylate kinase
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13_1_40cm_4_scaffold_1518_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(10722..12035)
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3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] id=14627231 bin=bin7_NC10_sister species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
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13_1_40cm_4_scaffold_1518_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(12032..12880)
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prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase family protein id=4143295 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(12877..13989)
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hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=14627229 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
histidinol-phosphate aminotransferase (EC:2.6.1.9)
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13_1_40cm_4_scaffold_1518_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(14000..15061)
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pheA; chorismate mutase (EC:5.4.99.5)
pheA; chorismate mutase/prephenate dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chorismate mutase/prephenate dehydratase id=3333763 bin=GWA2_Methylomirabilis_73_35 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15131..15703)
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pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pseudouridine synthase id=3333767 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pseudouridine synthase
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13_1_40cm_4_scaffold_1518_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15810..16415)
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scpB; Segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Segregation and condensation protein B id=3333773 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
scpB; Segregation and condensation protein B
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13_1_40cm_4_scaffold_1518_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(16399..17187)
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chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3333777 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
segregation and condensation protein A
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13_1_40cm_4_scaffold_1518_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(17184..18176)
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trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) id=3333940 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(18176..18952)
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family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycosyl transferase family 2 id=3333943 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
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13_1_40cm_4_scaffold_1518_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(18949..19998)
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ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] id=14627222 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
ADP-heptose--LPS heptosyltransferase
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13_1_40cm_4_scaffold_1518_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(19995..20459)
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cytidyltransferase-related domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cytidyltransferase-related domain protein id=3333947 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cytidyltransferase-related domain-containing protein
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13_1_40cm_4_scaffold_1518_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(20566..21567)
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D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PfkB domain protein id=3956926 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-beta-D-heptose 7-phosphate kinase
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13_1_40cm_4_scaffold_1518_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(21564..22118)
|
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Rok
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase id=3956928 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(22174..23283)
|
group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3956931 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
|
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13_1_40cm_4_scaffold_1518_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(23546..24676)
|
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=3956935 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glycosyl transferase, group 1
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13_1_40cm_4_scaffold_1518_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(24673..25797)
|
putative phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=2909548 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia phytofirmans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
group 1 glycosyl transferase
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13_1_40cm_4_scaffold_1518_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(25794..26912)
|
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3956940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
|
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13_1_40cm_4_scaffold_1518_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(26909..27901)
|
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-)
ADP-heptose--LPS heptosyltransferase II (Modular protein) id=3956942 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(27898..28917)
|
lipid-A-disaccharide synthase (EC:2.4.1.182); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=GWA2_Rokubacteria_73_35_curated
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase id=3956947 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(28977..30275)
|
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) id=3956951 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_4_scaffold_1518_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(30275..30931)
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K09778 hypothetical protein id=14627188 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
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