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13_1_40cm_4_scaffold_1564

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1564_1

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2..253
DNA (252bp) protein (84aa)
NADH dehydrogenase (Quinone) (NuoH) {ECO:0000313|EMBL:AIF12408.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF12408.1};; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJZ5_DESAR
13_1_40cm_4_scaffold_1564_2
RBG_16_Archaea_50_20_curated, Archaea

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275..757
DNA (483bp) protein (161aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
13_1_40cm_4_scaffold_1564_3
RBG_16_Archaea_50_20_curated, Archaea

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761..1069
DNA (309bp) protein (103aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14427491 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NADH-ubiquinone oxidoreductase subunit 4L Tax=RBG_16_Archaea_50_20_curated
NADH-ubiquinone oxidoreductase subunit 4L
13_1_40cm_4_scaffold_1564_4
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1076..2581
DNA (1506bp) protein (502aa)
formate hydrogenlyase subunit 3/Multisubunit Na/H antiporter (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUP1_9ARCH
proton-translocating NADH-quinone oxidoreductase subunit M Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_4_scaffold_1564_5

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2586..4676
DNA (2091bp) protein (697aa)
NADH-ubiquinone oxidoreductase subunit L (NuoL) {ECO:0000313|EMBL:AIF12403.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF12403.1};; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" sourc
NADH dehydrogenase subunit L (EC:1.6.5.3)
proton-translocating NADH-quinone oxidoreductase subunit L id=14427488 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_1564_6
RBG_16_Archaea_50_20_curated, Archaea

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4678..6168
DNA (1491bp) protein (497aa)
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Candidatus Methanomassiliicoccus intestinalis RepID=UPI00034241C0
NADH-ubiquinone oxidoreductase chain M
13_1_40cm_4_scaffold_1564_7
RBG_16_Archaea_50_20_curated, Archaea

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6175..7644
DNA (1470bp) protein (490aa)
NADH-ubiquinone oxidoreductase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
Proton-translocating NADH-quinone oxidoreductase, chain N n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUR2_9ARCH
Proton-translocating NADH-quinone oxidoreductase, chain N
13_1_40cm_4_scaffold_1564_8
unknown

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comp(7621..8211)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_9
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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8344..8661
DNA (318bp) protein (106aa)
Thermococcus eurythermalis strain A501, complete genome {ECO:0000313|EMBL:AIU69412.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AIU69412.1};; TaxID=1505907 species="Archaea; Euryarchaeota; Thermococci; Thermococ
13_1_40cm_4_scaffold_1564_10
RBG_16_Archaea_50_20_curated, Archaea

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8666..9271
DNA (606bp) protein (202aa)
V-type ATP synthase subunit E (EC:3.6.3.14); K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] Tax=RBG_16_Archaea_50_20_curated
V-type proton ATPase subunit E n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U3X3_9EURY
atpE; V-type ATP synthase subunit E
13_1_40cm_4_scaffold_1564_11
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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9283..11265
DNA (1983bp) protein (661aa)
Archaeal/vacuolar-type H+-ATPase subunit I n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BND0_9EURY
Archaeal/vacuolar-type H+-ATPase subunit I
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sul
13_1_40cm_4_scaffold_1564_12
Xiphophorus maculatus, Xiphophorus, Cyprinodontiformes, Neopterygii, Chordata, Metazoa

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11270..11752
DNA (483bp) protein (161aa)
PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit n=1 Tax=Jaculus jaculus RepID=UPI00033323E9
Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000009882}; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleo
H+-transporting two-sector ATPase subunit C
13_1_40cm_4_scaffold_1564_13
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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11765..12838
DNA (1074bp) protein (358aa)
V-type ATP synthase subunit C n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCG5_METIK
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Meth
V-type ATP synthase subunit C
13_1_40cm_4_scaffold_1564_14
unknown

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comp(12869..13474)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_15
unknown

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comp(13489..14439)
DNA (951bp) protein (317aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(14460..16649)
DNA (2190bp) protein (730aa)
inorganic pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N534_9ARCH
13_1_40cm_4_scaffold_1564_17
RBG_16_Archaea_50_20_curated, Archaea

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16956..17933
DNA (978bp) protein (326aa)
Geranylgeranyl reductase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XK85_METZD
geranylgeranyl reductase Tax=RBG_16_Archaea_50_20_curated
geranylgeranyl reductase
13_1_40cm_4_scaffold_1564_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(17930..18853)
DNA (924bp) protein (308aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RBG_16_Archaea_50_20_curated
protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMD0_9FIRM
13_1_40cm_4_scaffold_1564_19
unknown

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comp(18874..19479)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_20
RBG_16_Archaea_50_20_curated, Archaea

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comp(19476..20906)
DNA (1431bp) protein (477aa)
Cytochrome b/b6 family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D1P8_9ARCH
cytochrome b/b6 domain-containing protein Tax=RBG_16_Archaea_50_20_curated
cytochrome b/b6 domain-containing protein
13_1_40cm_4_scaffold_1564_21
unknown

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comp(20890..21585)
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_22
RBG_16_Archaea_50_20_curated, Archaea

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21897..22895
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI00037FF3A0
4Fe4S ferredoxin iron-sulfur binding domain containing protein Tax=RBG_16_Archaea_50_20_curated
4Fe-4S binding domain-containing protein
13_1_40cm_4_scaffold_1564_23
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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23043..24329
DNA (1287bp) protein (429aa)
Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000313|EMBL:EAR49507.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EAR49507.1};; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rho
Phosphoribosylformylglycinamidine synthase subunit II n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CA03_9RHOB
hypothetical protein
13_1_40cm_4_scaffold_1564_24
unknown

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comp(24346..24675)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_25
unknown

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24914..25198
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_26
unknown

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25195..25494
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_27
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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25491..27398
DNA (1908bp) protein (636aa)
Predicted hydrolases or acyltransferases Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
13_1_40cm_4_scaffold_1564_28
unknown

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27846..28013
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_1564_29
unknown

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28069..28185
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 29 items

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