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13_1_40cm_4_scaffold_1567

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1567_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3..107)
DNA (105bp) protein (35aa)
metG; methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEP0_9BACT
13_1_40cm_4_scaffold_1567_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(158..1027)
DNA (870bp) protein (290aa)
putative PSP1-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tpl protein id=14626710 bin=bin7_NC10_sister species=Shuttleworthia satelles genus=Shuttleworthia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
PSP1 domain-containing protein
13_1_40cm_4_scaffold_1567_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1038..1877)
DNA (840bp) protein (280aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase III, delta prime subunit id=4657188 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase III subunit delta'
13_1_40cm_4_scaffold_1567_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1867..2487)
DNA (621bp) protein (207aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=GWA2_Rokubacteria_73_35_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=4657189 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1567_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2609..6493
DNA (3885bp) protein (1295aa)
adenylate/guanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
adenylate/guanylate cyclase id=14627613 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate/guanylate cyclase
13_1_40cm_4_scaffold_1567_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6484..7263
DNA (780bp) protein (260aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56)
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_1_40cm_4_scaffold_1567_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7265..7894
DNA (630bp) protein (210aa)
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=U3GKE9_SINAD
hypothetical protein
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGA24985.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia;
13_1_40cm_4_scaffold_1567_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7917..8618
DNA (702bp) protein (234aa)
Glycosyltransferase id=2319272 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
family 2 glycosyl transferase
13_1_40cm_4_scaffold_1567_9
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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8728..10350
DNA (1623bp) protein (541aa)
Glycosyl transferase, family 39 n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZW93_9PLAN
Dolichyl-phosphate-mannose-protein mannosyltransferase Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_1_40cm_4_scaffold_1567_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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10358..12259
DNA (1902bp) protein (634aa)
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase Tax=GWC2_Rokubacteria_70_16_curated
asparagine synthase
13_1_40cm_4_scaffold_1567_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(12279..13409)
DNA (1131bp) protein (377aa)
histone deacetylase/AcuC/AphA family protein id=14626707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
histone deacetylase/AcuC/AphA family protein Tax=CSP1_6_Rokubacteria
histone deacetylase/AcuC/AphA family protein
13_1_40cm_4_scaffold_1567_12
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(13780..13965)
DNA (186bp) protein (62aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8FZW5_9CYAN
moaC; molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=272129 species="Bact
13_1_40cm_4_scaffold_1567_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(13996..14217)
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626705 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1567_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(14384..15481)
DNA (1098bp) protein (366aa)
Tungsten transporter ATP binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tungsten transporter ATP binding protein id=2315313 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tungsten transporter ATP binding protein
13_1_40cm_4_scaffold_1567_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(15478..16596)
DNA (1119bp) protein (373aa)
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC transporter ATP-binding protein id=2315314 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_1567_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(16602..17222)
DNA (621bp) protein (207aa)
molybdenum ABC transporter permease; K02018 molybdate transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ABC transporter permease; K02018 molybdate transport system permease protein id=14626700 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
13_1_40cm_4_scaffold_1567_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(17258..18013)
DNA (756bp) protein (252aa)
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein id=14626699 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter substrate binding protein
13_1_40cm_4_scaffold_1567_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(18037..18732)
DNA (696bp) protein (232aa)
ABC-type tungstate transport permease protein id=2315318 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transporters inner membrane component; K05773 tungstate transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
tungstate ABC transporter permease
13_1_40cm_4_scaffold_1567_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18732..19583)
DNA (852bp) protein (284aa)
ABC-type tungstate transport system permease component-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport system permease component-like protein id=2315320 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type tungstate transport system permease component-like protein
13_1_40cm_4_scaffold_1567_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(19580..19909)
DNA (330bp) protein (110aa)
putative transcriptional regulator, ModE family; K02019 molybdate transport system regulatory protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative transcriptional regulator, ModE family id=3965663 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative transcriptional regulator, ModE family
13_1_40cm_4_scaffold_1567_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19986..22316)
DNA (2331bp) protein (777aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein id=4400745 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein Tax=GWA2_Rokubacteria_70_23_curated
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_4_scaffold_1567_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22321..22803)
DNA (483bp) protein (161aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIS6_MESAW
carbon monoxide dehydrogenase small chain
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:AHK46886.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; E
13_1_40cm_4_scaffold_1567_23
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(22823..23689)
DNA (867bp) protein (289aa)
Putative carbon monoxide dehydrogenase medium chain n=2 Tax=Clostridiales RepID=C5EGQ6_9FIRM
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RBG_16_Chloroflexi_68_14_curated
h16_A3369; molybdopterin dehydrogenase
13_1_40cm_4_scaffold_1567_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(23698..24927)
DNA (1230bp) protein (410aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Aldehyde Dehydrogenase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
NAD-dependent aldehyde dehydrogenase
13_1_40cm_4_scaffold_1567_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(25164..26096)
DNA (933bp) protein (311aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acyl-D-aspartate deacylase (EC:3.5.1.83)
d-aminoacylase id=2315330 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1567_26
unknown

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26306..26632
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying 26 items

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