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13_1_40cm_4_scaffold_159

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_159_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

2..364
DNA (363bp) protein (121aa)
methylmalonyl-CoA mutase, alpha subunit; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_16_Archaea_50_20_curated
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N378_9EURY
methylmalonyl-CoA mutase subunit alpha
13_1_40cm_4_scaffold_159_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

569..1006
DNA (438bp) protein (146aa)
Acetyltransferase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8Y3_STRVR
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
GCN5-related N-acetyltransferase
13_1_40cm_4_scaffold_159_3
unknown

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1305..1757
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_4
unknown

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comp(1595..2230)
DNA (636bp) protein (212aa)
hypothetical protein
13_1_40cm_4_scaffold_159_5
unknown

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comp(2178..2579)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_6
unknown

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2658..2900
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2878..3384)
DNA (507bp) protein (169aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036A964E
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_4_scaffold_159_8
unknown

Not on your lists

3521..3790
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_9
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4072..4422)
DNA (351bp) protein (117aa)
Lactoylglutathione lyase-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AM16_IGNAJ
Lactoylglutathione lyase-like protein
Lactoylglutathione lyase-like protein {ECO:0000313|EMBL:AFH50023.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="
13_1_40cm_4_scaffold_159_10
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(4503..5270)
DNA (768bp) protein (256aa)
purine nucleosidase (EC:3.2.2.1)
Purine nucleosidase {ECO:0000313|EMBL:BAJ48099.1}; EC=3.2.2.1 {ECO:0000313|EMBL:BAJ48099.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" so
Purine nucleosidase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N730_9ARCH
13_1_40cm_4_scaffold_159_11
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(5470..6108)
DNA (639bp) protein (213aa)
Nicotinamidase-like amidase n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C2B2_9CREN
Nicotinamidase-like amidase {ECO:0000313|EMBL:EHP70383.1}; Flags: Precursor;; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallo
isochorismatase hydrolase
13_1_40cm_4_scaffold_159_12
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

6190..7416
DNA (1227bp) protein (409aa)
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-) Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC:1.14.13.-)
Putative 2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE96_9BACT
13_1_40cm_4_scaffold_159_13
unknown

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comp(7734..9296)
DNA (1563bp) protein (521aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(9446..10744)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035C941A
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_159_15
unknown

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comp(10830..11078)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_16

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comp(11308..12231)
DNA (924bp) protein (308aa)
modification methylase n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B54648
Cytosine methylase, similar to N4-cytosine methylase {ECO:0000313|EMBL:CAH04249.1}; TaxID=285013 species="Viruses; dsDNA viruses, no RNA stage; Bicaudaviridae; unclassified Bicaudaviridae.;" source="S
DNA methylase
13_1_40cm_4_scaffold_159_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12310..12894
DNA (585bp) protein (195aa)
Isochorismatase hydrolase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTC5_9DELT
Isochorismatase hydrolase {ECO:0000313|EMBL:EPX59908.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
isochorismatase hydrolase
13_1_40cm_4_scaffold_159_18
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(12933..13478)
DNA (546bp) protein (182aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8A985_IGNH4
3-isopropylmalate dehydratase small subunit
13_1_40cm_4_scaffold_159_19
Methanosphaera stadtmanae, Methanosphaera, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13475..14752)
DNA (1278bp) protein (426aa)
leuC1; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NE97_METST
13_1_40cm_4_scaffold_159_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14815..15933)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQQ9_9CHLR
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_4_scaffold_159_21
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16014..16496
DNA (483bp) protein (161aa)
Diamine N-acetyltransferase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPE3_GRAMM
acetyltransferase Tax=RBG_16_Anaeromyxobacter_69_14_curated
Diamine N-acetyltransferase
13_1_40cm_4_scaffold_159_22
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16515..17699)
DNA (1185bp) protein (395aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48] Tax=RBG_13_Deltaproteobacteria_53_10_curated
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine beta-lyase MetC n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SPC9_9CHLR
13_1_40cm_4_scaffold_159_23
unknown

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comp(17851..20520)
DNA (2670bp) protein (890aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_24
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(20658..22355)
DNA (1698bp) protein (566aa)
Acetolactate synthase, large subunit n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FD1_METBF
acetolactate synthase
Acetolactate synthase {ECO:0000313|EMBL:AKB28563.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sic
13_1_40cm_4_scaffold_159_25

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comp(22352..23374)
DNA (1023bp) protein (341aa)
Phosphoesterase {ECO:0000313|EMBL:CCC55529.1}; EC=3.1.4.3 {ECO:0000313|EMBL:CCC55529.1};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035D9D1F
phosphoesterase
13_1_40cm_4_scaffold_159_26
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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comp(23410..24012)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKK4_METP4
TetR family transcriptional regulator Tax=RBG_13_Euryarchaeota_57_23_curated
TetR family transcriptional regulator
13_1_40cm_4_scaffold_159_27
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

24100..24972
DNA (873bp) protein (291aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7A9_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH79770.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like
13_1_40cm_4_scaffold_159_28
unknown

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24984..25196
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_159_29
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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25193..26152
DNA (960bp) protein (320aa)
ABC transporter ATP-binding protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R2X9_METFO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF85592.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_159_30
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

26154..27269
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C6B38
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC-2 type transporter
Displaying items 1-30 of 88 in total

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