name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_1606_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(3..1499)
|
long-chain fatty acid CoA ligase (AMP-binding) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AMP-dependent synthetase and ligase id=2278568 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
AMP-dependent synthetase/ligase
|
|
13_1_40cm_4_scaffold_1606_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria
|
Not on your lists |
1680..2126
|
id=14626096 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14626096 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
|
|
13_1_40cm_4_scaffold_1606_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(2131..2625)
|
polyhydroxyalkanoate synthesis repressor PhaR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polyhydroxyalkanoate synthesis repressor PhaR id=2278566 bin=GWA2_Elusimicrobia_69_24 species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
polyhydroxyalkanoate synthesis repressor PhaR
|
|
13_1_40cm_4_scaffold_1606_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
2743..3486
|
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(acyl-carrier-protein) reductase id=14626098 bin=bin7_NC10_sister species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
|
|
13_1_40cm_4_scaffold_1606_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(3464..3775)
|
acyl dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl dehydratase id=3479315 bin=GWC2_Methylomirabilis_70_16 species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydratase
|
|
13_1_40cm_4_scaffold_1606_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(4521..5639)
|
poly(R)-hydroxyalkanoic acid synthase subunit PhaC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14626101 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
|
|
13_1_40cm_4_scaffold_1606_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(5662..5982)
|
sterol-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative sterol carrier protein id=4320175 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sterol-binding protein
|
|
13_1_40cm_4_scaffold_1606_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(6052..6801)
|
dehydrogenase/reductase 11 (EC:1.1.1.-); K00100 [EC:1.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable oxidoreductase (Short-chain dehydrogenase family) id=4117790 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
|
|
13_1_40cm_4_scaffold_1606_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria
|
Not on your lists |
comp(6803..7576)
|
enoyl-CoA hydratase/carnithine racemase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA hydratase/isomerase id=1890904 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
|
|
13_1_40cm_4_scaffold_1606_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(7566..8153)
|
TetR family transcriptional regulator; K13770 TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TetR family id=1890906 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator
|
|
13_1_40cm_4_scaffold_1606_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(8231..9562)
|
amidohydrolase Tax=GWA2_Rokubacteria_73_35_curated
Amidohydrolase id=4800307 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
|
|
13_1_40cm_4_scaffold_1606_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
9693..12266
|
hypothetical protein; K06890 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate enzyme id=2783151 bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate enzyme
|
|
13_1_40cm_4_scaffold_1606_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
|
Not on your lists |
comp(12306..13307)
|
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] id=14626116 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] Tax=CSP1_6_Rokubacteria
threonine dehydratase (EC:4.3.1.19)
|
|
13_1_40cm_4_scaffold_1606_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
13342..14304
|
putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=GWA2_Rokubacteria_73_35_curated
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA id=3526411 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
|
|
13_1_40cm_4_scaffold_1606_15
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria
|
Not on your lists |
comp(14286..14480)
|
hypothetical protein id=24596142 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
|
|
13_1_40cm_4_scaffold_1606_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(14477..15052)
|
Coenzyme A pyrophosphatase id=1890929 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
coenzyme A pyrophosphatase Tax=GWA2_Rokubacteria_73_35_curated
coenzyme A pyrophosphatase
|
|
13_1_40cm_4_scaffold_1606_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(15081..15866)
|
oxidoreductase (EC:1.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative oxidoreductase id=1890936 bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase family protein
|
|
13_1_40cm_4_scaffold_1606_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(15909..16670)
|
sir2 family protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] id=1241516 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
sir2 family protein
|
|
13_1_40cm_4_scaffold_1606_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria
|
Not on your lists |
comp(16728..17519)
|
abortive infection protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Abortive infection protein id=1890947 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abortive infection protein
|
|
13_1_40cm_4_scaffold_1606_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(17512..18939)
|
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWC2_Rokubacteria_70_16_curated
Amidase id=3014927 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
|
|
13_1_40cm_4_scaffold_1606_21
unknown
|
Not on your lists |
comp(18932..19084)
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_1606_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
|
Not on your lists |
comp(19103..19948)
|
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
|
|
13_1_40cm_4_scaffold_1606_23
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20050..20829
|
two-component hybrid histidine kinase (EC:2.7.3.-)
Putative PAS/PAC sensor protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQ40_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
|
|
13_1_40cm_4_scaffold_1606_24
unknown
|
Not on your lists |
20965..21165
|
This feature has no annotations |
|
13_1_40cm_4_scaffold_1606_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
21352..21768
|
Two component, sigma54 specific, transcriptional regulator, Fis family id=4020045 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
chemotaxis protein CheY
|