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13_1_40cm_4_scaffold_1622

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1622_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..768)
-----------------
DNA (768bp)
protein (256aa)
Putative oxidoreductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2R1_CALAS
putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative oxidoreductase
13_1_40cm_4_scaffold_1622_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(888..1823)
-----------------
DNA (936bp)
protein (312aa)
fumarylacetoacetate (FAA) hydrolase family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Fumarylacetoacetate (FAA) hydrolase family protein id=4695032 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
fumarylacetoacetate (FAA) hydrolase family protein
13_1_40cm_4_scaffold_1622_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2167..3216
-----------------
DNA (1050bp)
protein (350aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037A2EAA
luciferase-like protein Tax=GWA2_Rokubacteria_70_23_curated
luciferase-like protein
13_1_40cm_4_scaffold_1622_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3226..4002
-----------------
DNA (777bp)
protein (259aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4I8_9RHIZ
3-oxoacyl-ACP synthase
13_1_40cm_4_scaffold_1622_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4042..4914)
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HB37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX01289.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_1622_6

Not on your lists

4946..6490
-----------------
DNA (1545bp)
protein (515aa)
Bacterial extracellular solute-binding proteins, family 5 Middle {ECO:0000313|EMBL:AIA17927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_4_scaffold_1622_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6504..7319)
-----------------
DNA (816bp)
protein (272aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
alpha/beta hydrolase fold protein id=14627593 bin=bin7_NC10_sister species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
13_1_40cm_4_scaffold_1622_8
unknown

Not on your lists

comp(7456..7737)
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_1622_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7935..8717
-----------------
DNA (783bp)
protein (261aa)
Peptidase S1 and S6, chymotrypsin/Hap id=2868270 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase S1 and S6, chymotrypsin/Hap Tax=GWC2_Rokubacteria_70_16_curated
peptidase S1 and S6 chymotrypsin/Hap
13_1_40cm_4_scaffold_1622_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8811..9239
-----------------
DNA (429bp)
protein (143aa)
Putative uncharacterized protein n=1 Tax=uncultured Chloroflexi bacterium HF4000_28F02 RepID=E0XWA5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETW94153.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glyoxalase
13_1_40cm_4_scaffold_1622_11
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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9319..9516
-----------------
DNA (198bp)
protein (66aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QJN5_9CYAN
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:AGY59207.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
13_1_40cm_4_scaffold_1622_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9528..11018)
-----------------
DNA (1491bp)
protein (497aa)
Uncharacterized protein id=1833932 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1622_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11439..12404)
-----------------
DNA (966bp)
protein (322aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Extra-cytoplasmic Solute Receptor id=1833934 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_1622_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12445..13368)
-----------------
DNA (924bp)
protein (308aa)
id=2937951 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=2937951 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_4_scaffold_1622_15
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13459..14175)
-----------------
DNA (717bp)
protein (239aa)
Tricarboxylate transport membrane protein TctA n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLF5_9RHIZ
hypothetical protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
putative transmembrane protein
13_1_40cm_4_scaffold_1622_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

14256..14816
-----------------
DNA (561bp)
protein (187aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_4_scaffold_1622_17
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14988..15473
-----------------
DNA (486bp)
protein (162aa)
Putative uncharacterized protein orf2 n=1 Tax=Nocardioides sp. RepID=O24726_9ACTO
Putative uncharacterized protein orf2 Tax=RBG_13_Deltaproteobacteria_47_9_curated
13_1_40cm_4_scaffold_1622_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15516..16133
-----------------
DNA (618bp)
protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TLV3_DESML
TetR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
transcriptional regulator
13_1_40cm_4_scaffold_1622_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16130..16858
-----------------
DNA (729bp)
protein (243aa)
phenylacetic acid degradation protein paaA Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Probable phenylacetic acid degradation protein paaA id=2043722 bin=GWD2_Deltaproteobacteria_55_8 species=Chromobacterium violaceum genus=Chromobacterium taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phenylacetic acid catabolic protein
13_1_40cm_4_scaffold_1622_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16896..17633
-----------------
DNA (738bp)
protein (246aa)
Possible ribulose-5-phosphate 4-epimerase and related epimerases n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YKY5_MOBAS
Ribulose-5-phosphate 4-epimerase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative ribulose-5-phosphate 4-epimerase-like epimerase
13_1_40cm_4_scaffold_1622_21
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17617..18675)
-----------------
DNA (1059bp)
protein (353aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX07052.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=4770810 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_40cm_4_scaffold_1622_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18905..19969
-----------------
DNA (1065bp)
protein (355aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
D-3-phosphoglycerate dehydrogenase id=1940935 bin=GWD2_Deltaproteobacteria_55_8 species=Thermosynechococcus elongatus genus=Thermosynechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
D-3-phosphoglycerate dehydrogenase
13_1_40cm_4_scaffold_1622_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

20057..20332
-----------------
DNA (276bp)
protein (92aa)
MaoC domain-containing protein dehydratase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
MaoC domain protein dehydratase id=1921103 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dehydratase
13_1_40cm_4_scaffold_1622_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20368..20838)
-----------------
DNA (471bp)
protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TCP4_9GAMM
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
13_1_40cm_4_scaffold_1622_25
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20970..22028)
-----------------
DNA (1059bp)
protein (353aa)
Luciferase-like monooxygenase n=1 Tax=Frankia sp. EUN1f RepID=D3D2C3_9ACTO
alkanal monooxygenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
alkanal monooxygenase
13_1_40cm_4_scaffold_1622_26
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22025..23101)
-----------------
DNA (1077bp)
protein (359aa)
Putative dioxigenase oxidoreductase n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GEJ0_9ACTO
Putative dioxigenase oxidoreductase {ECO:0000313|EMBL:EGX58058.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresist
cupin
13_1_40cm_4_scaffold_1622_27
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23098..23460)
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000348041E
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:ADG06994.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / N
Displaying 27 items

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