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13_1_40cm_4_scaffold_1684

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1684_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1..1077
DNA (1077bp) protein (359aa)
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) (EC:2.4.1.25) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
4-alpha-glucanotransferase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=MALQ_THEKO
4-alpha-glucanotransferase
13_1_40cm_4_scaffold_1684_2
unknown

Not on your lists

1309..1680
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_3
unknown

Not on your lists

comp(1701..1991)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_4
unknown

Not on your lists

comp(2182..2679)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_5
unknown

Not on your lists

comp(2689..3216)
DNA (528bp) protein (176aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_6
unknown

Not on your lists

comp(3389..3823)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_7
unknown

Not on your lists

4038..4211
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_8
unknown

Not on your lists

4307..4825
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_9
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4830..6209
DNA (1380bp) protein (460aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQU8_KYRT2
amidohydrolase domain-containing protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
amidohydrolase
13_1_40cm_4_scaffold_1684_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6187..6690)
DNA (504bp) protein (168aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFW9_SINAD
DNA-binding ferritin-like protein
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:AGA28269.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Sing
13_1_40cm_4_scaffold_1684_11
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6735..7271)
DNA (537bp) protein (179aa)
DSBA oxidoreductase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1B3_ANAVT
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ABA25230.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
13_1_40cm_4_scaffold_1684_12
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7283..8197)
DNA (915bp) protein (305aa)
pirin; K06911 Tax=GWA2_Ignavibacteria_54_16_curated
hypothetical protein; K06911 id=24497726 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pirin
13_1_40cm_4_scaffold_1684_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8266..9891)
DNA (1626bp) protein (542aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H1_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_40cm_4_scaffold_1684_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9933..12218)
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1684_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(12344..13558)
DNA (1215bp) protein (405aa)
Putative macrolide efflux ABC transporter permease n=3 Tax=Myxococcus RepID=F8CKF2_MYXFH id=5224471 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative macrolide efflux ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative macrolide efflux ABC transporter permease
13_1_40cm_4_scaffold_1684_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13561..15051)
DNA (1491bp) protein (497aa)
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative macrolide-specific efflux protein MacA
13_1_40cm_4_scaffold_1684_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15048..15791)
DNA (744bp) protein (248aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_1684_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15788..17110)
DNA (1323bp) protein (441aa)
Putative outer membrane macrolide efflux protein n=2 Tax=Myxococcus RepID=Q1D4Q0_MYXXD id=5224473 bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
outer membrane macrolide efflux protein Tax=RBG_16_RIF_WS3X_71_46_curated
putative outer membrane macrolide efflux protein
13_1_40cm_4_scaffold_1684_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17107..17532)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=3180377 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_40cm_4_scaffold_1684_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17550..17888)
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1684_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17885..18469)
DNA (585bp) protein (195aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_4_scaffold_1684_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18462..19877)
DNA (1416bp) protein (472aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUH0_9GAMM
phospholipase D/transphosphatidylase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phospholipase
13_1_40cm_4_scaffold_1684_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19874..20461)
DNA (588bp) protein (196aa)
Metal dependent phosphohydrolase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_1684_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20537..21466)
DNA (930bp) protein (310aa)
asparagine synthetase (EC:6.3.5.4)
asparagine synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
asparagine synthase id=24424238 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_4_scaffold_1684_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21463..22329)
DNA (867bp) protein (289aa)
Asparagine synthetase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7A9_SINAD
asparagine synthase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
asparagine synthase
13_1_40cm_4_scaffold_1684_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22329..23891)
DNA (1563bp) protein (521aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BJ5_METCA
dolichyl-phosphate-mannose-protein mannosyltransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dolichyl-phosphate-mannose-protein mannosyltransferase
13_1_40cm_4_scaffold_1684_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

24066..24476
DNA (411bp) protein (137aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=14627432 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1684_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24526..25068
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQD9_HALH1
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG88781.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1684_29
unknown

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comp(25086..25661)
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_4_scaffold_1684_30
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

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26385..27353
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00035DD1CD
peptidase S9 prolyl oligopeptidase Tax=RBG_13_Euryarchaeota_57_23_curated
translocation protein TolB
Displaying items 1-30 of 31 in total

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