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13_1_40cm_4_scaffold_1757

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1757_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3..218)
DNA (216bp) protein (72aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curate
transcriptional regulator domain-containing protein
13_1_40cm_4_scaffold_1757_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(215..1771)
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_40cm_4_scaffold_1757_3
unknown

Not on your lists

comp(1783..2346)
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_4_scaffold_1757_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3025..4341
DNA (1317bp) protein (439aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
Alpha-galactosidase-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZD0_9EURY
Alpha-galactosidase-like protein
13_1_40cm_4_scaffold_1757_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4621..5031
DNA (411bp) protein (137aa)
alpha-galactosidase (EC:3.2.1.22); K07407 alpha-galactosidase [EC:3.2.1.22] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Conserved domain protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LJW4_9BACE
13_1_40cm_4_scaffold_1757_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5138..5941)
DNA (804bp) protein (268aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4522148 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
sugar ABC transporter permease
13_1_40cm_4_scaffold_1757_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5934..7694)
DNA (1761bp) protein (587aa)
sugar ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
binding-protein-dependent transporters inner membrane component
13_1_40cm_4_scaffold_1757_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7717..8997)
DNA (1281bp) protein (427aa)
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4214564 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Extracellular solute-binding protein family 1
13_1_40cm_4_scaffold_1757_9
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8994..10064)
DNA (1071bp) protein (357aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ69_THEM7
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADU52093.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae
13_1_40cm_4_scaffold_1757_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10108..10584)
DNA (477bp) protein (159aa)
Putative thiol-specific antioxidant protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A982_GEMAT
putative thiol-specific antioxidant protein
Putative thiol-specific antioxidant protein {ECO:0000313|EMBL:BAH39059.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas a
13_1_40cm_4_scaffold_1757_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10581..11006)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein SclubSA_04243 id=2073410 bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_1757_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11438..12085
DNA (648bp) protein (216aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003614830
13_1_40cm_4_scaffold_1757_13
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(12199..12819)
DNA (621bp) protein (207aa)
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
Putative uncharacterized protein id=2834602 bin=GWC2_Ignavibacteria_56_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
13_1_40cm_4_scaffold_1757_14
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12850..13212)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YUF8_MELRP
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1757_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13265..13516)
DNA (252bp) protein (84aa)
Cysteine-rich CPXCG protein
Cysteine-rich CPXCG protein {ECO:0000313|EMBL:AHG91532.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1757_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(13527..14042)
DNA (516bp) protein (172aa)
metal-binding protein id=14426788 bin=bin1_lowGC species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
metal-binding protein Tax=CSP1_2_Dadabacteria
conserved hypothetical protein
13_1_40cm_4_scaffold_1757_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14048..14833)
DNA (786bp) protein (262aa)
histidinol-phosphate phosphatase (EC:3.1.3.15); K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Histidinol-phosphate phosphatase n=1 Tax=Frankia sp. CN3 RepID=G6HHN8_9ACTO
histidinol-phosphate phosphatase
13_1_40cm_4_scaffold_1757_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14838..15641)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3H2_TERSS
Putative MetA-pathway of phenol degradation {ECO:0000313|EMBL:CDM64847.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphato
hypothetical protein
13_1_40cm_4_scaffold_1757_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

15739..17835
DNA (2097bp) protein (699aa)
rhaD; putative rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (EC:1.1.1.1 4.1.2.19)
short chain dehydrogenase id=14625860 bin=bin7_NC10_sister species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
short chain dehydrogenase Tax=CSP1_6_Rokubacteria
13_1_40cm_4_scaffold_1757_20
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17883..18593)
DNA (711bp) protein (237aa)
Transcriptional repressor DcmR n=2 Tax=Rhizobiales RepID=DCMR_METED
dcmR; transcriptional repressor of DCM dehalogenase
Transcriptional repressor DcmR; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain D
13_1_40cm_4_scaffold_1757_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18822..19271
DNA (450bp) protein (150aa)
Response regulator, LuxR family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBT9_9BACT
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
LuxR family response regulator
13_1_40cm_4_scaffold_1757_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19268..20914)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
diguanylate cyclase
13_1_40cm_4_scaffold_1757_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20931..22940)
DNA (2010bp) protein (670aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Arthrospira sp. PCC 8005 RepID=H1WJE0_9CYAN
diguanylate cyclase and serine/threonine protein kinase with TPR repeats Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1757_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(22969..23685)
DNA (717bp) protein (239aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1757_25
unknown

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comp(23694..23930)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 25 items

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