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13_1_40cm_4_scaffold_180

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_180_1
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(215..1366)
DNA (1152bp) protein (384aa)
Eight transmembrane protein EpsH (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZBL1_9BACT
transmembrane protein EpsH Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
transmembrane protein EpsH
13_1_40cm_4_scaffold_180_2
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1315..2097)
DNA (783bp) protein (261aa)
UbiE/COQ5 methyltransferase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TMK6_9MICO
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:EAP99611.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
putative methyltransferase
13_1_40cm_4_scaffold_180_3
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2090..3028)
DNA (939bp) protein (313aa)
Polysaccharide deacetylase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R111_PIRSD
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ADB18496.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (s
13_1_40cm_4_scaffold_180_4
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3025..4650)
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373B9A4
polysaccharide biosynthesis protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_4_scaffold_180_5
unknown

Not on your lists

comp(4654..4767)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_4_scaffold_180_6
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4764..6587)
DNA (1824bp) protein (608aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A63B8
asparagine synthase
13_1_40cm_4_scaffold_180_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6605..7501)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003761D97
hypothetical protein Tax=RBG_16_Deltaproteobacteria_64_85_curated
hypothetical protein
13_1_40cm_4_scaffold_180_8
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7498..8685)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=B5EGZ2_GEOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH38094.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjien
13_1_40cm_4_scaffold_180_9
unknown

Not on your lists

8719..8868
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_4_scaffold_180_10
unknown

Not on your lists

comp(8974..9387)
DNA (414bp) protein (138aa)

This feature has no annotations

13_1_40cm_4_scaffold_180_11
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9417..10709
DNA (1293bp) protein (431aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
hypothetical protein
gem:GM21_3182 hypothetical protein id=16778 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
13_1_40cm_4_scaffold_180_12
unknown

Not on your lists

comp(10633..10779)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_180_13
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10794..12119)
DNA (1326bp) protein (442aa)
O-antigen polymerase id=1750053 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
O-antigen polymerase Tax=GWD2_Desulfuromonadales_54_10_curated
exopolysaccharide biosynthesis lipoprotein
13_1_40cm_4_scaffold_180_14
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(12302..13177)
DNA (876bp) protein (292aa)
Glycosyl transferase, family 2 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGV6_SYNFM
glycosyl transferase family protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
glycosyl transferase family protein
13_1_40cm_4_scaffold_180_15
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(13335..14651)
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132); K00066 GDP-mannose 6-dehydrogenase [EC:1.1.1.132] Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
nucleotide sugar dehydrogenase (EC:1.1.1.132)
Nucleotide sugar dehydrogenase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B6K9_9DELT
13_1_40cm_4_scaffold_180_16
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(14658..15842)
DNA (1185bp) protein (395aa)
glycoside hydrolase family protein Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
13_1_40cm_4_scaffold_180_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15968..17371)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000370CC2A
Uncharacterized protein {ECO:0000313|EMBL:ETX05771.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_4_scaffold_180_18
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17368..18162)
DNA (795bp) protein (265aa)
Methionyl-tRNA formyltransferase n=1 Tax=Geobacillus thermoglucosidasius (strain C56-YS93) RepID=F8CWV2_GEOTC
formyl transferase-like protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
methionyl-tRNA formyltransferase
13_1_40cm_4_scaffold_180_19
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18305..19600)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00037D7BD7
group 1 glycosyl transferase Tax=RBG_13_Planctomycetes_44_8b_curated
group 1 glycosyl transferase
13_1_40cm_4_scaffold_180_20
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(19616..21334)
DNA (1719bp) protein (573aa)
hypothetical protein Tax=RBG_13_Nitrospirae_39_12_curated
Putative uncharacterized protein id=4361891 bin=GWF2_Lentisphaerae_57_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
13_1_40cm_4_scaffold_180_21
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(21401..22555)
DNA (1155bp) protein (385aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=GWF2_Lentisphaerae_57_35_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase id=4103717 bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_40cm_4_scaffold_180_22

Not on your lists

comp(22552..24240)
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365DB46
Uncharacterized protein {ECO:0000313|EMBL:EKD29007.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_180_23
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24252..25304)
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABU56901.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABU56901.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHF4_ROSCS
13_1_40cm_4_scaffold_180_24
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(25396..26610)
DNA (1215bp) protein (405aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGW6_SYNFM
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_1_40cm_4_scaffold_180_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(26607..27104)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000368B15B
hexapaptide repeat-containing transferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hexapaptide repeat-containing transferase
13_1_40cm_4_scaffold_180_26
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27101..28102)
DNA (1002bp) protein (334aa)
oxidoreductase domain-containing protein id=15192123 bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
oxidoreductase domain-containing protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_180_27
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(28148..29272)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003782EE1
undecaprenyl-phosphate galactose phosphotransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
undecaprenyl-phosphate galactose phosphotransferase
13_1_40cm_4_scaffold_180_28
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(29466..29672)
DNA (207bp) protein (69aa)
UDP-glucose/GDP-mannose dehydrogenase (EC:1.1.1.-) Tax=RBG_16_Chloroflexi_63_12_curated
putative UDP-glucose/GDP-mannose dehydrogenase
Displaying 28 items

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