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13_1_40cm_4_scaffold_1820

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1820_1
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..480)
DNA (480bp) protein (160aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7A0_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:AIU93767.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_1820_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(477..1085)
DNA (609bp) protein (203aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92) id=24458173 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92) Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
13_1_40cm_4_scaffold_1820_3
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1092..1514)
DNA (423bp) protein (141aa)
Putative transcriptional regulator n=1 Tax=Frankia sp. QA3 RepID=I8ZW12_9ACTO
Putative transcriptional regulator {ECO:0000313|EMBL:EIV91236.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
DNA-binding protein
13_1_40cm_4_scaffold_1820_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1531..2058)
DNA (528bp) protein (176aa)
polyketide cyclase n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI000311B5F3
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1820_5
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(2062..3285)
DNA (1224bp) protein (408aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFR9_THET1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACZ41775.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).
13_1_40cm_4_scaffold_1820_6

Not on your lists

comp(3286..4134)
DNA (849bp) protein (283aa)
Marine sediment metagenome DNA, contig: S01H1_S11598 {ECO:0000313|EMBL:GAG00421.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Acetyltransferase (GNAT) family protein id=7201376 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
acetyltransferase
13_1_40cm_4_scaffold_1820_7
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(4116..4919)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC72_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ42387.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_4_scaffold_1820_8
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4995..6671
DNA (1677bp) protein (559aa)
Thymidylate synthase complementing protein ThyX n=2 Tax=Chloroflexus RepID=A9WDJ9_CHLAA
thymidylate synthase complementing protein ThyX
Thymidylate synthase complementing protein ThyX {ECO:0000313|EMBL:ABY33605.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus
13_1_40cm_4_scaffold_1820_9
unknown

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6707..6901
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_1820_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6975..7733
DNA (759bp) protein (253aa)
Asparaginase {ECO:0000313|EMBL:ABS25710.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ABS25710.1};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxoba
Asparaginase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAG4_ANADF
asparaginase
13_1_40cm_4_scaffold_1820_11
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7738..9366
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Mycobacterium avium 05-4293 RepID=V7J3R0_MYCAV
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:ETZ41460.1}; TaxID=1335419 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium;
acetolactate synthase
13_1_40cm_4_scaffold_1820_12
unknown

Not on your lists

comp(9496..9729)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_1820_13
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9723..9974)
DNA (252bp) protein (84aa)
Tax=RBG_16_Actinobacteria_67_15_curated
13_1_40cm_4_scaffold_1820_14
RLO_PLX_64_10, Bacteria

Not on your lists

10298..10684
DNA (387bp) protein (129aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI00036FFA21
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_4_scaffold_1820_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10763..11626)
DNA (864bp) protein (288aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component id=3327047 bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
multi-copper enzyme maturation ABC transporter permease Tax=GWC2_RIF_CHLX_73_18_curated
multi-copper enzyme maturation ABC transporter permease
13_1_40cm_4_scaffold_1820_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11626..12594)
DNA (969bp) protein (323aa)
ABC-type transport system, ATPase component id=3327051 bin=GWC2_Chloroflexi_73_18 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter
13_1_40cm_4_scaffold_1820_17
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12789..13853)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RIP2_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02236.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
13_1_40cm_4_scaffold_1820_18
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13870..14373)
DNA (504bp) protein (168aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FD11_VERMA
ECF subfamily RNA polymerase sigma-24 subunit
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AEB44843.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosis
13_1_40cm_4_scaffold_1820_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14447..14932)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS72_KORVE id=5225133 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_4_scaffold_1820_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14936..15508)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2F3_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38420.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_4_scaffold_1820_21
unknown

Not on your lists

comp(15505..16044)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_40cm_4_scaffold_1820_22
unknown

Not on your lists

16055..16252
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_1820_23
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16552..17592)
DNA (1041bp) protein (347aa)
Transcriptional regulator, DeoR family n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2NPB7_9PSEU
Hypothetical protein
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EMD24054.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azu
13_1_40cm_4_scaffold_1820_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

17689..17997
DNA (309bp) protein (103aa)
Uncharacterized MFS-type transporter yusP n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EGE2_9CHLR
putative drug transport protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
EmrB/QacA subfamily drug resistance transporter
Displaying 24 items

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