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13_1_40cm_4_scaffold_1809

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1809_1
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..514)
DNA (513bp) protein (171aa)
Luciferase-like monooxygenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L3I1_HALJP
Uncharacterized protein {ECO:0000313|EMBL:KKC06911.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
Luciferase-like, subgroup
13_1_40cm_4_scaffold_1809_2
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(528..1760)
DNA (1233bp) protein (411aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1X8_DESTA
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AFM23569.1}; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntropho
13_1_40cm_4_scaffold_1809_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1881..2360
DNA (480bp) protein (160aa)
hypothetical protein
Putative uncharacterized protein id=1718108 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
13_1_40cm_4_scaffold_1809_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2385..3662)
DNA (1278bp) protein (426aa)
yqjV-like MFS-type transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein id=1735155 bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yqjV-like MFS-type transporter
13_1_40cm_4_scaffold_1809_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3771..4523
DNA (753bp) protein (251aa)
iron-containing alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
1,3-propanediol dehydrogenase id=3821886 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase, class IV
13_1_40cm_4_scaffold_1809_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4656..5090
DNA (435bp) protein (145aa)
nucleotidyltransferase (EC:2.7.7.-) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
nucleotidyltransferase (EC:2.7.7.-)
Uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGY6_METTF
13_1_40cm_4_scaffold_1809_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5087..5518
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1Y9_DESAP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
13_1_40cm_4_scaffold_1809_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5534..5965)
DNA (432bp) protein (144aa)
Amidohydrolase id=1757965 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
trzA; N-ethylammeline chlorohydrolase
13_1_40cm_4_scaffold_1809_9
unknown

Not on your lists

6216..7088
DNA (873bp) protein (291aa)

This feature has no annotations

13_1_40cm_4_scaffold_1809_10
unknown

Not on your lists

7116..7748
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_40cm_4_scaffold_1809_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..8115)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003713D47
alkylhydroperoxidase like protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
alkylhydroperoxidase like protein, AhpD family
13_1_40cm_4_scaffold_1809_12
unknown

Not on your lists

comp(8116..8352)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_4_scaffold_1809_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8446..9381
DNA (936bp) protein (312aa)
oxidoreductase, aryl-alcohol dehydrogenase like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldo/keto reductase id=3139747 bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
13_1_40cm_4_scaffold_1809_14
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9381..10289
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6Q9_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28586.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
13_1_40cm_4_scaffold_1809_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10513..11370
DNA (858bp) protein (286aa)
phosphate/phosphonate ABC transporter periplasmic protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Putative uncharacterized protein id=1314843 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
phosphate/phosphonate ABC transporter periplasmic protein
13_1_40cm_4_scaffold_1809_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11370..14420
DNA (3051bp) protein (1017aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI00037F51C8
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA31577.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila
13_1_40cm_4_scaffold_1809_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14567..15649
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361F0ED
Uncharacterized protein {ECO:0000313|EMBL:ETX05983.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_4_scaffold_1809_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15662..19066)
DNA (3405bp) protein (1135aa)
Pyruvate carboxylase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q6C1_9RHOO
pyruvate carboxylase Tax=RBG_16_Betaproteobacteria_64_18_curated
pyruvate carboxylase
13_1_40cm_4_scaffold_1809_19
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19072..19869)
DNA (798bp) protein (266aa)
Putative permease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFC8_AZOSU
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP47407.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
13_1_40cm_4_scaffold_1809_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20087..21280)
DNA (1194bp) protein (398aa)
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
two component system response regulator, sigma54-specific id=14627447 bin=bin7_NC10_sister species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Fis family transcriptional regulator
13_1_40cm_4_scaffold_1809_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21439..22899
DNA (1461bp) protein (487aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003829A2D
ABC transporter sulfonate/nitrate transport system substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
sulfonate/nitrate ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1809_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22899..23714
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000366BB31
binding-protein dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
ABC-type nitrate/sulfonate/bicarbonate transport system
13_1_40cm_4_scaffold_1809_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23711..24529
DNA (819bp) protein (273aa)
ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GAV9_SORC5
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CAN92918.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="
13_1_40cm_4_scaffold_1809_24
unknown

Not on your lists

24526..25149
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_4_scaffold_1809_25
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25146..25685
DNA (540bp) protein (180aa)
Electron transport protein SCO1/SenC n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y593_LEPCP
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACB32323.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptot
13_1_40cm_4_scaffold_1809_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25825..26697
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI00037DFF52
luciferase family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
F420-dependent N5 N10-methylene tetrahydromethanopterin reductase
13_1_40cm_4_scaffold_1809_27
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27058..27594
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037DFEE5
esterase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
13_1_40cm_4_scaffold_1809_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27638..27757
DNA (120bp) protein (40aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
13_1_40cm_4_scaffold_1809_29
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27915..28589
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02101.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein id=14627880 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
anti-ECFsigma factor, ChrR
13_1_40cm_4_scaffold_1809_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28644..29915
DNA (1272bp) protein (424aa)
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
gsiB4; glutathione ABC transporter substrate binding protein GsiB
Displaying 30 items

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