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13_1_40cm_4_scaffold_1828

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1828_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2..361)
DNA (360bp) protein (120aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=14625424 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
adenylosuccinate lyase (EC:4.3.2.2)
13_1_40cm_4_scaffold_1828_2
unknown

Not on your lists

647..928
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_1828_3
unknown

Not on your lists

1097..2548
DNA (1452bp) protein (484aa)

This feature has no annotations

13_1_40cm_4_scaffold_1828_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2918..4708)
DNA (1791bp) protein (597aa)
5-nitroanthranilic acid aminohydrolase n=1 Tax=Bradyrhizobium sp. RepID=NAAA_BRASZ
hypothetical protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
peptidase M20
13_1_40cm_4_scaffold_1828_5
unknown

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comp(4705..4881)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_4_scaffold_1828_6
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5447..6229)
DNA (783bp) protein (261aa)
ABC transporter permease n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QES0_9BRAD
ABC transporter permease {ECO:0000313|EMBL:EGP10260.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_1828_7
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6229..6876)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QES1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP10261.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.
twin-arginine translocation pathway signal
13_1_40cm_4_scaffold_1828_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6873..7589)
DNA (717bp) protein (239aa)
Nicotinamidase-like amidase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VSA8_9BRAD
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJN09072.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" so
pncA; bifunctional pyrazinamidase/nicotinamidase
13_1_40cm_4_scaffold_1828_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7589..8842)
DNA (1254bp) protein (418aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626658 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1828_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8856..9566)
DNA (711bp) protein (237aa)
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_cura
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator
13_1_40cm_4_scaffold_1828_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9658..10641
DNA (984bp) protein (328aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_70_23_curated
Uroporphyrinogen decarboxylase id=4355655 bin=GWF2_Methylomirabilis_70_14 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
13_1_40cm_4_scaffold_1828_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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10638..12131
DNA (1494bp) protein (498aa)
Oligopeptide ABC transporter substrate-binding protein id=3191860 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
oligopeptide ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_1828_13
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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12167..12532
DNA (366bp) protein (122aa)
cupin 2 barrel domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Putative uncharacterized protein id=2193858 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cupin
13_1_40cm_4_scaffold_1828_14
Amorphus coralli, Amorphus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12532..12882
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000381661B
13_1_40cm_4_scaffold_1828_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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12886..13728
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_1_40cm_4_scaffold_1828_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13735..14202
DNA (468bp) protein (156aa)
DoxX family protein; K15977 putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein; K15977 putative oxidoreductase id=14431357 bin=bin3_NC10 species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_1828_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14092..15279)
DNA (1188bp) protein (396aa)
Glycosyl hydrolase, BNR repeat protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46P13_CUPPJ
BNR repeat-containing glycosyl hydrolase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
BNR repeat-containing glycosyl hydrolase
13_1_40cm_4_scaffold_1828_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15276..17597)
DNA (2322bp) protein (774aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_70_23_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037155A5
13_1_40cm_4_scaffold_1828_19
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17724..18917
DNA (1194bp) protein (398aa)
Extracellular ligand-binding receptor n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUI0_GEOS8
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
extracellular ligand-binding receptor
13_1_40cm_4_scaffold_1828_20
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18933..19814
DNA (882bp) protein (294aa)
Inner-membrane translocator n=3 Tax=Rhodobacter RepID=A3PQM7_RHOS1
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
Inner-membrane translocator precursor
13_1_40cm_4_scaffold_1828_21
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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19811..20755
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002ED1D0F
putative high-affinity branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_1828_22
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20761..21483)
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
13_1_40cm_4_scaffold_1828_23
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21458..22159)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000321BD9A
livG3; putative branched-chain amino acids ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_1828_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(22219..23103)
DNA (885bp) protein (295aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T3_SPHTD
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ACZ40226.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae
13_1_40cm_4_scaffold_1828_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(23100..24209)
DNA (1110bp) protein (370aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
13_1_40cm_4_scaffold_1828_26
unknown

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24714..24914
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_1828_27
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25468..25959)
DNA (492bp) protein (164aa)
(2Fe-2S)-binding domain-containing protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGF2_THEM7
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:ADU51604.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobac
13_1_40cm_4_scaffold_1828_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(25959..26327)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCY9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE72953.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
13_1_40cm_4_scaffold_1828_29
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26365..26757)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3W9_9RHIZ
translation initiation inhibitor Tax=RBG_16_Betaproteobacteria_64_18_curated
putative translation initiation inhibitor, yjgF family
13_1_40cm_4_scaffold_1828_30
unknown

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comp(26778..26936)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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