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13_1_40cm_4_scaffold_196

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_196_1
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1010)
DNA (1008bp) protein (336aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SI13_THEM7
Uncharacterized protein {ECO:0000313|EMBL:KJS22135.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
amino acid ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_196_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1027..1890)
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW99478.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative NHL repeat protein id=3749658 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NHL repeat family protein
13_1_40cm_4_scaffold_196_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2023..2670
DNA (648bp) protein (216aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX05086.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Putative Nitroreductase family protein id=3995084 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Nitroreductase
13_1_40cm_4_scaffold_196_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2675..3223
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Uncharacterized protein id=4219880 bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cation/multidrug efflux pump
13_1_40cm_4_scaffold_196_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3270..3791
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003792D81
Uncharacterized protein {ECO:0000313|EMBL:ETX08868.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_196_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3788..4588
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3D0_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:ETW99033.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_1_40cm_4_scaffold_196_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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4606..5526
DNA (921bp) protein (307aa)
Putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ML3_CUPPJ
putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components
13_1_40cm_4_scaffold_196_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5564..6523)
DNA (960bp) protein (320aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
dth:DICTH_1037 oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein id=1242173 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_4_scaffold_196_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(6525..7520)
DNA (996bp) protein (332aa)
sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein id=1242174 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Chloroflexi_51_36_curated
oppD; oligopeptide/dipeptide ABC transporter, ATPase subunit
13_1_40cm_4_scaffold_196_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7520..9067)
DNA (1548bp) protein (516aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
13_1_40cm_4_scaffold_196_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9138..10067)
DNA (930bp) protein (310aa)
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08386.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
ABC transporter permease; K02034 peptide/nickel transport system permease protein id=1242175 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_196_12
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10054..10977)
DNA (924bp) protein (308aa)
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIX15537.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
ABC transporter permease id=4621966 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2950; ABC transporter permease
13_1_40cm_4_scaffold_196_13
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(11008..12672)
DNA (1665bp) protein (555aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
Extracellular solute-binding protein, family 5 id=4828364 bin=GWC2_Syntrophus__56_31 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_196_14
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(12793..14400)
DNA (1608bp) protein (536aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_196_15
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14484..15896)
DNA (1413bp) protein (471aa)
vdcc protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Putative carboxylyase-like protein (Fragment) id=1975345 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridia bacterium enrichment culture clone BF genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
13_1_40cm_4_scaffold_196_16
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15915..16367)
DNA (453bp) protein (151aa)
ABC transporter substrate-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MNE5_9BURK
ABC transporter substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_196_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16364..17398)
DNA (1035bp) protein (345aa)
urate catabolism protein (EC:3.5.1.41)
Uricase (Urate oxidase) n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GU57_9PROT
Chitin deacetylase {ECO:0000313|EMBL:KJB97107.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata
13_1_40cm_4_scaffold_196_18
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17395..18720)
DNA (1326bp) protein (442aa)
aminotransferase V n=1 Tax=Lentibacillus jeotgali RepID=UPI0002625C58
Aminotransferase V {ECO:0000313|EMBL:EXX85095.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
pucG; purine catabolism protein PucG
13_1_40cm_4_scaffold_196_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18812..21025
DNA (2214bp) protein (738aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) id=14626052 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
13_1_40cm_4_scaffold_196_20
uncultured crenarchaeote, Crenarchaeota, Archaea

Not on your lists

21128..22153
DNA (1026bp) protein (342aa)
Sulfonate/nitrate/taurine ABC transporter substrate-binding protein n=2 Tax=Archaea RepID=E6N845_9ARCH
sulfonate/nitrate/taurine ABC transporter substrate-binding protein
Sulfonate/nitrate/taurine transport system substrate-binding protein {ECO:0000313|EMBL:BAL57799.1}; TaxID=29281 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeo
13_1_40cm_4_scaffold_196_21
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

22251..23090
DNA (840bp) protein (280aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3P2_CALAS
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL99879.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea ae
13_1_40cm_4_scaffold_196_22
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23087..23842
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI0003621FD7
ABC transporter permease {ECO:0000313|EMBL:AIE18667.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulf
ABC-type transporter, integral membrane subunit
13_1_40cm_4_scaffold_196_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23866..25074
DNA (1209bp) protein (403aa)
Predicted membrane protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SN04_HAHCH id=5223413 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
protein of unknown function DUF989
13_1_40cm_4_scaffold_196_24
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25078..25602
DNA (525bp) protein (175aa)
OHCU decarboxylase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A8045B
OHCU decarboxylase {ECO:0000313|EMBL:EJM98456.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp.
OHCU decarboxylase
13_1_40cm_4_scaffold_196_25
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25599..25970
DNA (372bp) protein (124aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JZT3_AGRVS
pucM; hydroxyisourate hydrolase
13_1_40cm_4_scaffold_196_26
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26174..26440
DNA (267bp) protein (89aa)
Acetolactate synthase II n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GV71_CUPNN
ilvG3; acetolactate synthase II Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
Displaying 26 items

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