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13_1_40cm_4_scaffold_1965

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1965_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(125..478)
DNA (354bp) protein (118aa)
Ribosomal silencing factor RsfS n=2 Tax=Desulfotomaculum RepID=F6B8Q1_DESCC
hypothetical protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
iojap family protein
13_1_40cm_4_scaffold_1965_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(475..1053)
DNA (579bp) protein (193aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:3.5.4.4)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=NADD_ROSCS
13_1_40cm_4_scaffold_1965_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1026..2246)
DNA (1221bp) protein (407aa)
GTPase Obg n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1Q0_SPHTD
GTPase obg; K03979 GTP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
GTP-binding protein Obg/CgtA
13_1_40cm_4_scaffold_1965_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2304..3536)
DNA (1233bp) protein (411aa)
Radical SAM domain protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6H6_DESAP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
radical SAM domain-containing protein
13_1_40cm_4_scaffold_1965_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(3579..3809)
DNA (231bp) protein (77aa)
peptidase M23 n=1 Tax=Patulibacter americanus RepID=UPI0003B5D550
peptidase M23 family protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptidase M23
13_1_40cm_4_scaffold_1965_6
unknown

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comp(3986..4744)
DNA (759bp) protein (253aa)

This feature has no annotations

13_1_40cm_4_scaffold_1965_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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4890..5261
DNA (372bp) protein (124aa)
nuoA; NADH dehydrogenase subunit A (EC:1.6.99.5); K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036154DB
NADH:ubiquinone oxidoreductase subunit A
13_1_40cm_4_scaffold_1965_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5231..5740
DNA (510bp) protein (170aa)
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLT5_MICPN
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1965_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5744..6892
DNA (1149bp) protein (383aa)
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NADH-quinone oxidoreductase subunit H id=2786803 bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
respiratory-chain NADH dehydrogenase subunit 1
13_1_40cm_4_scaffold_1965_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6914..7429
DNA (516bp) protein (172aa)
NADH dehydrogenase subunit J (EC:1.6.5.3)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00036819FF
NADH:ubiquinone oxidoreductase subunit J Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1965_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7426..7737
DNA (312bp) protein (104aa)
nuoK; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (EC:1.6.5.3 1.6.99.5) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
nuoK; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit K id=2141182 bin=GWD2_Chloroflexi_49_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_4_scaffold_1965_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7745..9646
DNA (1902bp) protein (634aa)
NADH dehydrogenase i subunit 5; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Nadh dehydrogenase i chain 5 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L176_THERP
NADH dehydrogenase i subunit 5
13_1_40cm_4_scaffold_1965_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9643..11169
DNA (1527bp) protein (509aa)
proton-translocating NADH-quinone oxidoreductase subunit M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJZ0_DESAR id=5223701 bin=16ft_combo_ws3_JS1 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
proton-translocating NADH-quinone oxidoreductase subunit M
13_1_40cm_4_scaffold_1965_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11186..12628
DNA (1443bp) protein (481aa)
nuoN; NADH-quinone oxidoreductase membrane subunit N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
NADH-quinone oxidoreductase subunit N 2 id=2434440 bin=GWC2_Deltaproteobacteria_55_46 species=Rhizobium mesoamericanum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
proton-translocating NADH-quinone oxidoreductase subunit N
13_1_40cm_4_scaffold_1965_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(12625..13011)
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1965_16
unknown

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comp(13008..13373)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_1965_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13374..13763)
DNA (390bp) protein (130aa)
dipeptidase n=1 Tax=Agromyces italicus RepID=UPI0003B4491E
peptidase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptidase M24
13_1_40cm_4_scaffold_1965_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

14642..15226
DNA (585bp) protein (195aa)
Rare lipoprotein A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA02_CONWI
Rare lipoprotein A Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Rare lipoprotein A
13_1_40cm_4_scaffold_1965_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15362..15700
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2III5_ANADE
gsiB; general stress protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
gsiB1; putative general stress protein GsiB
13_1_40cm_4_scaffold_1965_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15910..16209
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1965_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

16380..16637
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_40cm_4_scaffold_1965_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(16991..17551)
DNA (561bp) protein (187aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
metal dependent phosphohydrolase
13_1_40cm_4_scaffold_1965_23
unknown

Not on your lists

17600..17788
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_1965_24
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17723..19126)
DNA (1404bp) protein (468aa)
amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Chloroflexi_68_14_curated
Amidase (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAY8_SPHTD
13_1_40cm_4_scaffold_1965_25
unknown

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comp(19213..19365)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_4_scaffold_1965_26
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19440..20930)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Y2_9CLOT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptidase M23
13_1_40cm_4_scaffold_1965_27
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(21041..21391)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
13_1_40cm_4_scaffold_1965_28
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21621..22367
DNA (747bp) protein (249aa)
SPG23_c10, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28460.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;
Putative hydrolase or acyltransferase of alpha/beta superfamily id=4887561 bin=GWC2_Chloroflexi_73_18 species=Arthrobacter phenanthrenivorans genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hydrolase or acyltransferase of alpha/beta superfamily
13_1_40cm_4_scaffold_1965_29
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

22402..22917
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000365201D
Strain A contig00028, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54781.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
phosphoribosyltransferase
13_1_40cm_4_scaffold_1965_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23890..24828
DNA (939bp) protein (313aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) Tax=GWA2_Rokubacteria_70_23_curated
dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Roseomonas sp. B5 RepID=UPI0003793CBA
Displaying items 1-30 of 32 in total

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