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13_1_40cm_4_scaffold_2019

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2019_1
unknown

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2..379
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_4_scaffold_2019_2
unknown

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comp(399..929)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_2019_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(922..1599)
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase; K08966 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003807672
phosphoserine phosphatase
13_1_40cm_4_scaffold_2019_4
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1878..2453
DNA (576bp) protein (192aa)
Purine or other phosphorylase family 1 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L4H5_9BACI
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EGL83755.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus the
uridine phosphorylase
13_1_40cm_4_scaffold_2019_5
unknown

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comp(2551..2796)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_2019_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4364..4924
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGD5_9BURK
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_2019_7
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5015..5431
DNA (417bp) protein (139aa)
virulence protein n=1 Tax=Methylobacter marinus RepID=UPI000382C4CE
gloA3; lactoylglutathione lyase Tax=RBG_13_Deltaproteobacteria_43_22_curated
hypothetical protein
13_1_40cm_4_scaffold_2019_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5453..5899)
DNA (447bp) protein (149aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y567_THEBD
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ADG87342.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora
13_1_40cm_4_scaffold_2019_9
unknown

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comp(6586..6831)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_4_scaffold_2019_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

7011..7754
DNA (744bp) protein (248aa)
Putative 3-isopropylmalate dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE0_NITGG
3-isopropylmalate dehydratase Tax=RBG_16_Thaumarchaeota_49_8_curated
3-isopropylmalate dehydratase
13_1_40cm_4_scaffold_2019_11
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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7762..8628
DNA (867bp) protein (289aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ar
DNA methylase N-4/N-6 domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNP6_ARCVS
DNA methylase N-4/N-6 domain-containing protein
13_1_40cm_4_scaffold_2019_12
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(8594..9208)
DNA (615bp) protein (205aa)
2-haloacid dehalogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6C7_9ARCH
2-haloacid dehalogenase
2-haloacid dehalogenase {ECO:0000313|EMBL:BAJ47846.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterra
13_1_40cm_4_scaffold_2019_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9329..10081)
DNA (753bp) protein (251aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D316_9ARCH
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_38_9_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_4_scaffold_2019_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10128..11390)
DNA (1263bp) protein (421aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
Coenzyme A biosynthesis bifunctional protein coaBC n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE45_NITGG
phosphopantothenoylcysteine decarboxylase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_4_scaffold_2019_15
unknown

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comp(11403..11705)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_2019_16

Not on your lists

comp(11862..12944)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1A5P8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD55976.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_2019_17
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13047..13472)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUR5_METPS
hypothetical protein
UPF0146 protein MCP_0115 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella palud
13_1_40cm_4_scaffold_2019_18
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(13493..15880)
DNA (2388bp) protein (796aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RBG_13_Nitrospirae_39_12_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RXR3_THEPD
13_1_40cm_4_scaffold_2019_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


comp(15885..16358)
DNA (474bp) protein (158aa)
50S ribosomal protein L16 n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000367F825
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=RBG_16_Archaea_50_20_curated
rpl10e; 50S ribosomal protein L10e
13_1_40cm_4_scaffold_2019_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17053..17880)
DNA (828bp) protein (276aa)
Putative amidohydrolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC05_9EURY
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_4_scaffold_2019_21
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

18035..21499
DNA (3465bp) protein (1155aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_4_scaffold_2019_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(21496..22110)
DNA (615bp) protein (205aa)
Putative methyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYQ4_METPS
ribosomal L11 methyltransferase; K07579 putative methylase Tax=RBG_16_Bathyarchaeota_48_13_curated
putative methyltransferase
13_1_40cm_4_scaffold_2019_23

Not on your lists


comp(22111..23112)
DNA (1002bp) protein (334aa)
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 id=5103039 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Diphthamide synthase, subunit DPH2
Diphthamide synthase, subunit DPH2 {ECO:0000313|EMBL:AJF62320.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
13_1_40cm_4_scaffold_2019_24
unknown

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23254..23640
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_2019_25
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(23662..25935)
DNA (2274bp) protein (758aa)
Exonuclease SbcCD, C subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X1_9ARCH
exonuclease SbcCD, C subunit
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:BAJ48040.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_1_40cm_4_scaffold_2019_26
unknown

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comp(26025..26159)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 26 items

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