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13_1_40cm_4_scaffold_2024

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2024_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1048
DNA (1047bp) protein (349aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B3_GEMAT
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
oxidoreductase domain protein
13_1_40cm_4_scaffold_2024_2
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

1198..1890
DNA (693bp) protein (231aa)
cycloisomaltooligosaccharide glucanotransferase id=8266036 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein Tax=RBG_13_Aminicenantes_62_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2024_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1896..3497
DNA (1602bp) protein (534aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52] Tax=GWC2_Gemmatimonadetes_71_10_curated
Beta-N-acetylhexosaminidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B4_GEMAT
Beta-N-acetylhexosaminidase
13_1_40cm_4_scaffold_2024_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(3512..4279)
DNA (768bp) protein (256aa)
Putative Glycoside hydrolase, family 5 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFX8_9CHLR
Putative Glycoside hydrolase, family 5 {ECO:0000313|EMBL:CCF83590.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrol
cellulose-binding protein
13_1_40cm_4_scaffold_2024_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4322..4477)
DNA (156bp) protein (52aa)
Glycoside hydrolase family 5 n=1 Tax=Frankia sp. CN3 RepID=G6HB66_9ACTO
Cellulase (Glycosyl hydrolase 5) with CBM domain
Putative Glycoside hydrolase, family 5 {ECO:0000313|EMBL:CCF83590.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrol
13_1_40cm_4_scaffold_2024_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4671..4913
DNA (243bp) protein (81aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
13_1_40cm_4_scaffold_2024_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4923..5261
DNA (339bp) protein (113aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_2024_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5267..5773)
DNA (507bp) protein (169aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
thioredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Redoxin domain protein
13_1_40cm_4_scaffold_2024_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5770..6471)
DNA (702bp) protein (234aa)
thiol--disulfide interchange protein; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
thiol--disulfide interchange protein
13_1_40cm_4_scaffold_2024_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6475..7812)
DNA (1338bp) protein (446aa)
Oxidoreductase domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFA6_RHOMR
oxidoreductase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_2024_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7826..9034)
DNA (1209bp) protein (403aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH0_RHOM4
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:ACY48628.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
13_1_40cm_4_scaffold_2024_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9058..9759)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2024_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9783..10241)
DNA (459bp) protein (153aa)
Arginine repressor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=ARGR_SYMTH
arginine repressor ArgR; K03402 transcriptional regulator of arginine metabolism Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
transcriptional regulator
13_1_40cm_4_scaffold_2024_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10253..11416)
DNA (1164bp) protein (388aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA9_CHLTF
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
amidohydrolase
13_1_40cm_4_scaffold_2024_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11449..12354)
DNA (906bp) protein (302aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein, 1A family
13_1_40cm_4_scaffold_2024_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12318..13607)
DNA (1290bp) protein (430aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein, 1A family
13_1_40cm_4_scaffold_2024_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13676..14938
DNA (1263bp) protein (421aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2X8_9BACT
Tyrosyl-tRNA synthetase
13_1_40cm_4_scaffold_2024_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14981..15661
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH80_RHOMR
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_4_scaffold_2024_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15707..16894)
DNA (1188bp) protein (396aa)
Putative aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A624_GEMAT
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative aminotransferase
13_1_40cm_4_scaffold_2024_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16891..17706)
DNA (816bp) protein (272aa)
Putative peptide ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A623_GEMAT
putative peptide ABC transporter permease protein
Putative peptide ABC transporter permease protein {ECO:0000313|EMBL:BAH37683.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatim
13_1_40cm_4_scaffold_2024_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17777..18859
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA63_GEMAT
Patatin
Patatin {ECO:0000313|EMBL:AHG91762.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2024_22
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18856..19833)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036485F8
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AJE83461.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
13_1_40cm_4_scaffold_2024_23
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19857..20999)
DNA (1143bp) protein (381aa)
Glycosyl transferase group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S3E1_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY65147.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
13_1_40cm_4_scaffold_2024_24
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21113..22228)
DNA (1116bp) protein (372aa)
Glycosyl transferase group 1 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S3E1_9CYAN
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFY65147.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
13_1_40cm_4_scaffold_2024_25
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(22285..23343)
DNA (1059bp) protein (353aa)
group 1 glycosyl transferase id=14428687 bin=bin3_NC10 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
group 1 glycosyl transferase Tax=CSP1_5_NC10
glycosyl transferase family protein
13_1_40cm_4_scaffold_2024_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23368..24336
DNA (969bp) protein (323aa)
Methyltransferase FkbM family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF17_RUNSL
FkbM family methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
FkbM family methyltransferase
13_1_40cm_4_scaffold_2024_27
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

24353..25291
DNA (939bp) protein (313aa)
Glycosyl transferase, group 1 id=3446373 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Verminephrobacter eiseniae genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
group 1 glycosyl transferase Tax=GWB1_Bdellovibrionales_55_8_curated
glycosyltransferase
13_1_40cm_4_scaffold_2024_28
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

25336..26265
DNA (930bp) protein (310aa)
Uncharacterized protein id=2482461 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
glycosyltransferase Tax=GWA1_Bdellovibrionales_52_35_curated
glycosyltransferase
13_1_40cm_4_scaffold_2024_29
unknown

Not on your lists

comp(26280..26387)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 29 items

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