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13_1_40cm_4_scaffold_2055

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2055_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..195
DNA (195bp) protein (65aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_4_scaffold_2055_2
unknown

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296..487
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_2055_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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568..2277
DNA (1710bp) protein (570aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
fumarate reductase flavoprotein subunit id=14631497 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdA; fumarate reductase flavoprotein subunit frdA
13_1_40cm_4_scaffold_2055_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2281..3027
DNA (747bp) protein (249aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) id=14631498 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
13_1_40cm_4_scaffold_2055_5
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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3029..3421
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003811F5D
fumarate reductase subunit C; K00246 fumarate reductase subunit C Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
fumarate reductase
13_1_40cm_4_scaffold_2055_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3400..3804
DNA (405bp) protein (135aa)
fumarate reductase n=1 Tax=Psychromonas ossibalaenae RepID=UPI000363B774
fumarate reductase subunit D; K00247 fumarate reductase subunit D Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
frdD; fumarate reductase complex, membrane anchor subunit D
13_1_40cm_4_scaffold_2055_7
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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4089..6158
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z6B3_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EEG07757.1}; Flags: Precursor;; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" so
hypothetical protein
13_1_40cm_4_scaffold_2055_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(6276..6812)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKC9_9ARCH
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2055_9
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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7286..7627
DNA (342bp) protein (114aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Can
Carboxymuconolactone decarboxylase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUS3_9BACT
alkylhydroperoxidase
13_1_40cm_4_scaffold_2055_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(7638..8057)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_2055_11

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comp(8398..9054)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003451AF9
Uncharacterized protein {ECO:0000313|EMBL:KKN04314.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_4_scaffold_2055_12
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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9418..10302
DNA (885bp) protein (295aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AEF96823.1}; EC=2.6.1.42 {ECO:0000313|EMBL:AEF96823.1};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Metha
Branched-chain amino acid aminotransferase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BEM6_METIK
branched-chain amino acid aminotransferase
13_1_40cm_4_scaffold_2055_13
unknown

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comp(10378..10779)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_2055_14
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10792..11319)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXB3_METBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ35050.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
13_1_40cm_4_scaffold_2055_15
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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11369..12079
DNA (711bp) protein (237aa)
Haloacid dehalogenase domain protein hydrolase
Putative phosphatase id=2637013 bin=PER_GWC2_41_7 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:AIJ04929.1}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldoco
13_1_40cm_4_scaffold_2055_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12156..12977)
DNA (822bp) protein (274aa)
NIFsuperfamily domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC27_NITGG
NIF superfamily domain-containing protein
NIF superfamily domain-containing protein {ECO:0000313|EMBL:AIC15593.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_4_scaffold_2055_17
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13014..14465)
DNA (1452bp) protein (484aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=867903 species="Bacteria; Firmi
fumarase (EC:4.2.1.2)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003796A3B
13_1_40cm_4_scaffold_2055_18
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14788..15714
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000375034C
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
fumarylacetoacetate hydrolase family protein
13_1_40cm_4_scaffold_2055_19
unknown

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comp(15734..15922)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_2055_20
unknown

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16095..16286
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_4_scaffold_2055_21
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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16392..17075
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RCS8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK22038.1}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
13_1_40cm_4_scaffold_2055_22
unknown

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comp(17471..17797)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_4_scaffold_2055_23
unknown

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18506..19057
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_4_scaffold_2055_24

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19100..19423
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000361E9AC
Marine sediment metagenome DNA, contig: S01H4_C00141 {ECO:0000313|EMBL:GAG65620.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_2055_25
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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19498..20157
DNA (660bp) protein (220aa)
Alpha/beta hydrolase fold protein, dienelactone hydrolase family n=1 Tax=Arthrobacter sp. Rue61a RepID=J7LWV2_9MICC
alpha/beta hydrolase fold protein, dienelactone hydrolase family
Alpha/beta hydrolase fold protein, dienelactone hydrolase family {ECO:0000313|EMBL:AFR29104.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="
13_1_40cm_4_scaffold_2055_26
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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comp(20376..20777)
DNA (402bp) protein (134aa)
Uncharacterized protein n=10 Tax=Sulfolobus islandicus RepID=C3NFN8_SULIN
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2055_27
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(21550..23406)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B70321
putative hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
fibronectin type III domain-containing protein
13_1_40cm_4_scaffold_2055_28
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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23906..24970
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003745435
oxidoreductase domain-containing protein Tax=RBG_16_Thaumarchaeota_49_8_curated
oxidoreductase domain-containing protein
13_1_40cm_4_scaffold_2055_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25421..26029)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI000366A893
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85062.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_4_scaffold_2055_30
unknown

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26319..26873
DNA (555bp) protein (185aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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