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13_1_40cm_4_scaffold_205

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_205_1
unknown

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1..120
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_40cm_4_scaffold_205_2
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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188..559
DNA (372bp) protein (124aa)
Amicyanin {ECO:0000313|EMBL:AEF41833.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / D
amicyanin
13_1_40cm_4_scaffold_205_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(566..1633)
DNA (1068bp) protein (356aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87978.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_205_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1798..2070)
DNA (273bp) protein (91aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_205_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2084..2329)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_205_6
unknown

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2597..3817
DNA (1221bp) protein (407aa)

This feature has no annotations

13_1_40cm_4_scaffold_205_7
unknown

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4338..4673
DNA (336bp) protein (112aa)
Cupin 2 barrel domain-containing protein
13_1_40cm_4_scaffold_205_8
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4745..5587)
DNA (843bp) protein (281aa)
Beta-lactamase domain-containing protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E439_9BACL
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EJY55721.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacil
beta-lactamase
13_1_40cm_4_scaffold_205_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5997..6479
DNA (483bp) protein (161aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue-copper protein Tax=GWC2_Gemmatimonadetes_71_10_curated
blue (type 1) copper domain protein
13_1_40cm_4_scaffold_205_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6572..9412
DNA (2841bp) protein (947aa)
Putative Serine/threonine protein kinase PrkC regulator of stationary phase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0X8_9ACTN
protein kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_205_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9409..11277
DNA (1869bp) protein (623aa)
Transcriptional activator domain n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1B2_ROSS1
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_1_40cm_4_scaffold_205_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11332..12435
DNA (1104bp) protein (368aa)
Cytochrome-c peroxidase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRC1_HALO1
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:AHG88112.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_205_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12460..15162)
DNA (2703bp) protein (901aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
serine/threonine protein kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
protein kinase
13_1_40cm_4_scaffold_205_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15181..17118
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036361C6
transcriptional activator domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcriptional activator domain-containing protein
13_1_40cm_4_scaffold_205_15
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17174..17632
DNA (459bp) protein (153aa)
Tax=BJP_IG2069_Spirochaetales_48_31
13_1_40cm_4_scaffold_205_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17629..18201
DNA (573bp) protein (191aa)
SNARE associated Golgi protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6Q7_ANADF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_205_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18214..19077
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A779_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_205_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19123..20220
DNA (1098bp) protein (366aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_205_19
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

20234..20899
DNA (666bp) protein (222aa)
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4718612 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=GWA2_Elusimicrobia_69_24_curated
HAD-superfamily hydrolase, subfamily IA, variant 3
13_1_40cm_4_scaffold_205_20
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20901..21611
DNA (711bp) protein (237aa)
Putative nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1G2_SPHS2
nucleoside-diphosphate-sugar pyrophosphorylase
Putative nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:ADZ79235.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingo
13_1_40cm_4_scaffold_205_21
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21639..22484
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZR12_MELRP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN74499.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter r
13_1_40cm_4_scaffold_205_22
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22481..23821
DNA (1341bp) protein (447aa)
aminotransferase (EC:2.6.1.-)
aminotransferase class-III Tax=CG_Ignavi_01
Aminotransferase id=3804648 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_4_scaffold_205_23
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23793..24695
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:279 RepID=R7HNN1_9BACT
CDP-alcohol phosphatidyltransferase
Uncharacterized protein {ECO:0000313|EMBL:CDE40926.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
13_1_40cm_4_scaffold_205_24
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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24673..25722
DNA (1050bp) protein (350aa)
Oxidoreductase domain protein Tax=RBG_16_Acidobacteria_68_9_curated
Putative Oxidoreductase domain protein id=3383820 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Oxidoreductase domain protein
13_1_40cm_4_scaffold_205_25
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

25719..26717
DNA (999bp) protein (333aa)
Putative transmembrane protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZR17_MELRP
transmembrane protein Tax=CG_Ignavi_01
transmembrane protein
13_1_40cm_4_scaffold_205_26
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

26714..27157
DNA (444bp) protein (148aa)
id=3025508 Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
13_1_40cm_4_scaffold_205_27
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

27150..27758
DNA (609bp) protein (203aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
Putative CDP-alcohol phosphatidyltransferase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3G7_UNCMA
putative CDP-alcohol phosphatidyltransferase
13_1_40cm_4_scaffold_205_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27755..28714)
DNA (960bp) protein (320aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
phosphoesterase PA-phosphatase-like protein id=1249613 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_40cm_4_scaffold_205_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28711..29685)
DNA (975bp) protein (325aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase id=4674741 bin=GWA2_Ignavibacteriae_55_25 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_205_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(29682..30449)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036686F2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
Displaying 30 items

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