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13_1_40cm_4_scaffold_2172

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2172_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1..582)
-----------------
DNA (582bp)
protein (194aa)
dihydroxyacetone kinase subunit L; K05879 dihydroxyacetone kinase, C-terminal domain [EC:2.7.1.-] Tax=RBG_16_Chloroflexi_63_12_curated
Dihydroxyacetone kinase, L subunit n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GBS5_CHLAD
dihydroxyacetone kinase subunit L
13_1_40cm_4_scaffold_2172_2
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(592..960)
-----------------
DNA (369bp)
protein (123aa)
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:EFD24129.1}; EC=2.7.1.- {ECO:0000313|EMBL:EFD24129.1};; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistacea
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.121)
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L4D5_9BACT
13_1_40cm_4_scaffold_2172_3
unknown

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comp(1595..1885)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_2172_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1893..2612)
-----------------
DNA (720bp)
protein (240aa)
MIP family channel protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QV62_9EURY
MIP family channel protein {ECO:0000313|EMBL:EFW91580.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalop
MIP family channel protein
13_1_40cm_4_scaffold_2172_5
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2950..3504)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00035EA74F
antiterminator
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="P
13_1_40cm_4_scaffold_2172_6
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3528..4145)
-----------------
DNA (618bp)
protein (206aa)
Glycerol-3-phosphate responsive antiterminator, GlpP n=1 Tax=Paenibacillus lactis 154 RepID=G4H905_9BACL
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Pa
glycerol-3-phosphate responsive antiterminator, GlpP
13_1_40cm_4_scaffold_2172_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4207..4527
-----------------
DNA (321bp)
protein (107aa)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9M6_SPHTD
Phosphotransferase system, phosphocarrier protein HPr
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:ACZ40519.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacte
13_1_40cm_4_scaffold_2172_8
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4766..6217
-----------------
DNA (1452bp)
protein (484aa)
PTS mannose transporter subunit IIC n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A355_9PSED
PTS mannose transporter subunit IIC {ECO:0000313|EMBL:ERO64059.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
ptsP; phosphotransferase system, glucose-specific EI/HPr/EIIA component
13_1_40cm_4_scaffold_2172_9
RLO_WOR_2_51_24, WOR-2, Bacteria

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6254..8425
-----------------
DNA (2172bp)
protein (724aa)
Beta-galactosidase/beta-glucuronidase id=3975533 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Beta-galactosidase/beta-glucuronidase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
13_1_40cm_4_scaffold_2172_10
unknown

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8425..8811
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_2172_11
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

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8928..9956
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein; K01467 beta-lactamase [EC:3.5.2.6] id=15190971 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Penicillin-binding protein {ECO:0000313|EMBL:KKU61218.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
13_1_40cm_4_scaffold_2172_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(9953..10426)
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXJ8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84931.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_4_scaffold_2172_13
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10503..11105)
-----------------
DNA (603bp)
protein (201aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000363FF73
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96827.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_4_scaffold_2172_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11133..11585)
-----------------
DNA (453bp)
protein (151aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVC1_PSEUX
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEA23185.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
13_1_40cm_4_scaffold_2172_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(11585..12415)
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS09_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52219.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC
13_1_40cm_4_scaffold_2172_16
unknown

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12455..13093
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

13_1_40cm_4_scaffold_2172_17
Streptomyces sp. W007, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13116..13547)
-----------------
DNA (432bp)
protein (144aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. W007 RepID=H0BCB5_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EHM28698.1}; TaxID=1055352 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. W007.;"
hypothetical protein
13_1_40cm_4_scaffold_2172_18
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13550..14908)
-----------------
DNA (1359bp)
protein (453aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BGF1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPZ43033.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestr
cytosine/purines uracil thiamine allantoin permease
13_1_40cm_4_scaffold_2172_19
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15036..15395
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MXV6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK28684.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
13_1_40cm_4_scaffold_2172_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

15674..16603
-----------------
DNA (930bp)
protein (310aa)
RNA polymerase sigma factor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2M1_9CHLR
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2172_21
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16668..17597
-----------------
DNA (930bp)
protein (310aa)
HhH-GPD family protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W5D0_9ACTO
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:AGZ44217.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.
13_1_40cm_4_scaffold_2172_22
unknown

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17608..17781
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

13_1_40cm_4_scaffold_2172_23
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17823..19634
-----------------
DNA (1812bp)
protein (604aa)
glucoamylase n=1 Tax=Nonomuraea coxensis RepID=UPI000365E05E
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ABG05669.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source=
13_1_40cm_4_scaffold_2172_trna_1
unknown

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19649..19739
-----------------
DNA (91bp)
transferRNA
Displaying 24 items

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