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13_1_40cm_4_scaffold_2242

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2242_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

3..899
DNA (897bp) protein (299aa)
esterase; K01432 arylformamidase [EC:3.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D6B735
esterase
13_1_40cm_4_scaffold_2242_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(920..1378)
DNA (459bp) protein (153aa)
hypothetical protein; K09117 hypothetical protein id=14625991 bin=bin7_NC10_sister species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09117 hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_2242_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1396..2259)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035F7E4A
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_2242_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2252..3196)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Z6_SPHTD
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_2242_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3245..3922)
DNA (678bp) protein (226aa)
putative ABC transporter periplasmic binding protein A; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate binding protein (Dipeptide) id=4626997 bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter periplasmic binding protein A
13_1_40cm_4_scaffold_2242_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3919..4773)
DNA (855bp) protein (285aa)
putative ABC transporter periplasmic binding protein A; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate binding protein (Dipeptide) id=4626997 bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_2242_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4839..7355)
DNA (2517bp) protein (839aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Putative Hybrid sensor histidine kinase id=4728900 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor hybrid histidine kinase
13_1_40cm_4_scaffold_2242_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7528..10638)
DNA (3111bp) protein (1037aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=GWA2_Rokubacteria_73_35_curated
Acriflavin resistance protein id=2855764 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acriflavin resistance protein
13_1_40cm_4_scaffold_2242_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10635..11837)
DNA (1203bp) protein (401aa)
Efflux transporter, RND family, MFP subunit id=4900365 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=GWA2_Rokubacteria_73_35_curated
RND efflux membrane fusion protein
13_1_40cm_4_scaffold_2242_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11834..12334)
DNA (501bp) protein (167aa)
Transcriptional regulator, MarR family id=2855590 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator, MarR family Tax=GWA2_Rokubacteria_70_23_curated
transcriptional regulator, MarR family
13_1_40cm_4_scaffold_2242_11
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12396..13043)
DNA (648bp) protein (216aa)
Probable phosphatase n=3 Tax=Streptomyces RepID=Q50EC3_STRFL
hydrolase
HAD-superfamily hydrolase subfamily IA {ECO:0000313|EMBL:EWS90107.1}; TaxID=457430 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseospo
13_1_40cm_4_scaffold_2242_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13090..13512)
DNA (423bp) protein (141aa)
Pyridoxamine 5'-phosphate oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Pyridoxamine 5''-phosphate oxidase id=4696791 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxamine 5'-phosphate oxidase
13_1_40cm_4_scaffold_2242_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13560..14501)
DNA (942bp) protein (314aa)
Putative 2-hydroxyacid dehydrogenase id=4900340 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=GWA2_Rokubacteria_73_35_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
13_1_40cm_4_scaffold_2242_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14503..14772)
DNA (270bp) protein (90aa)
transcriptional regulator, AsnC family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4385649 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
transcriptional regulator, AsnC family
13_1_40cm_4_scaffold_2242_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14794..15216)
DNA (423bp) protein (141aa)
id=14627948 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=4895059 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2242_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15222..15563)
DNA (342bp) protein (114aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4895051 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2242_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15560..16471)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MIY5_CORCM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_4_scaffold_2242_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(16639..17118)
DNA (480bp) protein (160aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=2521453 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2242_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17425..21756)
DNA (4332bp) protein (1444aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=GWA2_Rokubacteria_73_35_curated
DEAD/H associated domain protein id=4895050 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP-dependent DNA helicase
13_1_40cm_4_scaffold_2242_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21776..22642)
DNA (867bp) protein (289aa)
arylformamidase (EC:3.5.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
arylformamidase (EC:3.5.1.9)
Arylformamidase n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SA17_9CYAN
13_1_40cm_4_scaffold_2242_21
unknown

Not on your lists

comp(22642..22776)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_4_scaffold_2242_22
unknown

Not on your lists

comp(22861..23454)
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_4_scaffold_2242_23
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(23451..24020)
DNA (570bp) protein (190aa)
hypothetical protein Tax=RBG_13_Spirochaetes_68_11_curated
hypothetical protein id=14425339 bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
13_1_40cm_4_scaffold_2242_24
unknown

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24023..24196
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 24 items

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