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13_1_40cm_4_scaffold_2286

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2286_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
alpha/beta hydrolase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036CB4BC
3-oxoadipate enol-lactonase
13_1_40cm_4_scaffold_2286_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(504..1439)
DNA (936bp) protein (312aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZ17_9EURY
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ERH09460.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
pyridoxal-phosphate dependent enzyme family protein
13_1_40cm_4_scaffold_2286_3
unknown

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1453..1623
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1620..2753
DNA (1134bp) protein (378aa)
putative ribonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
13_1_40cm_4_scaffold_2286_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2750..3058)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF59
13_1_40cm_4_scaffold_2286_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3405..4532)
DNA (1128bp) protein (376aa)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase
13_1_40cm_4_scaffold_2286_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(4544..5560)
DNA (1017bp) protein (339aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
13_1_40cm_4_scaffold_2286_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5635..6465)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Peptidase M10A and M12B matrixin and adamalysin {ECO:0000313|EMBL:AHG89655.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2286_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6556..8829
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037842C0
mmpL; hypothetical protein; K06994 putative drug exporter of the RND superfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2286_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(8822..9058)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2286_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9097..9474)
DNA (378bp) protein (126aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W7_GEMAT
putative pilin
Putative pilin {ECO:0000313|EMBL:AHG88689.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2286_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9572..12442)
DNA (2871bp) protein (957aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
13_1_40cm_4_scaffold_2286_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12515..12715)
DNA (201bp) protein (67aa)
Cold-shock protein DNA-binding protein
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88687.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock DNA-binding protein family id=2227709 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
13_1_40cm_4_scaffold_2286_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12882..15017)
DNA (2136bp) protein (712aa)
putative soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J920_ANAD2
hypothetical protein
13_1_40cm_4_scaffold_2286_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15014..16405)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2286_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16453..17367
DNA (915bp) protein (305aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
13_1_40cm_4_scaffold_2286_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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17360..17938
DNA (579bp) protein (193aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWC2_Gemmatimonadetes_71_10_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
13_1_40cm_4_scaffold_2286_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18863..19645
DNA (783bp) protein (261aa)
Methyl-accepting chemotaxis sensory transducer, class 40H n=2 Tax=Geobacter sulfurreducens RepID=D7AHH6_GEOSK
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
chemotaxis sensory transducer
13_1_40cm_4_scaffold_2286_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(19579..20448)
DNA (870bp) protein (290aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
AraC family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
AraC family transcriptional regulator
13_1_40cm_4_scaffold_2286_20
unknown

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20699..21190
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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21195..23669
DNA (2475bp) protein (825aa)
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG91672.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TPR repeat-containing serine/threonin protein kinase id=16927973 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
13_1_40cm_4_scaffold_2286_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23812..24453
DNA (642bp) protein (214aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_2286_23
unknown

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24392..25429
DNA (1038bp) protein (346aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_24
unknown

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25885..26709
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_25
unknown

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26880..27197
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_26
unknown

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comp(27045..27746)
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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28070..28525
DNA (456bp) protein (152aa)
aminopeptidase DmpA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Peptidase S58 DmpA id=3442412 bin=GWC2_Ignavibacteria_56_12 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
aminopeptidase
13_1_40cm_4_scaffold_2286_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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28555..29172
DNA (618bp) protein (206aa)
D-aminopeptidase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PJ76_9DELT
peptidase S58 DmpA
Peptidase S58 DmpA {ECO:0000313|EMBL:AHG88566.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2286_29
unknown

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29169..30980
DNA (1812bp) protein (604aa)

This feature has no annotations

13_1_40cm_4_scaffold_2286_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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31403..31648
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 39 in total

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