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13_1_40cm_4_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_24_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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366..1025
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58274.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_24_2
RBG_16_Archaea_50_20_curated, Archaea

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1060..1830
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VWV0_POLNA
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_4_scaffold_24_3
unknown

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comp(1880..2752)
DNA (873bp) protein (291aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2825..3760
DNA (936bp) protein (312aa)
acetyltransferase n=1 Tax=Rhizobium phaseoli RepID=UPI00031A8D1A
acetyltransferase
Probable acetyltransferase protein {ECO:0000313|EMBL:ACE92372.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobi
13_1_40cm_4_scaffold_24_5
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3773..4777)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI0003800429
yobF; hypothetical protein
Putative uncharacterized protein yobF {ECO:0000313|EMBL:BAH42106.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (s
13_1_40cm_4_scaffold_24_6
unknown

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4815..5252
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_7
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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comp(5964..6350)
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
Putative uncharacterized protein id=5007753 bin=GWA2_Deltaproteo_65_63 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_24_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6375..6905)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F40B4
OsmC family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
OsmC-like protein
13_1_40cm_4_scaffold_24_9
unknown

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comp(7009..7515)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_10
unknown

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7660..7917
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_11
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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comp(8025..10715)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_4_scaffold_24_12

Not on your lists

10927..11895
DNA (969bp) protein (323aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE92798.1}; TaxID=1457746 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote AD1000_28_C09.;"
hypothetical protein id=14632373 bin=bin9_gal15 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_24_13
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

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11946..12851
DNA (906bp) protein (302aa)
Cation efflux family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091Y8_STIAD
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family Tax=RBG_13_Chloroflexi_51_18_curated
cation efflux family protein
13_1_40cm_4_scaffold_24_14

Not on your lists

comp(12886..13737)
DNA (852bp) protein (284aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=mine drainage metagenome RepID=T0ZPH6_9ZZZZ
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EQD46427.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PEP phosphonomutase-like protein
13_1_40cm_4_scaffold_24_15
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(13782..14705)
DNA (924bp) protein (308aa)
Periplasmic binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SLS3_9BACT
Periplasmic solute binding protein {ECO:0000313|EMBL:BAL55796.1}; TaxID=236499 species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
periplasmic binding protein
13_1_40cm_4_scaffold_24_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

14784..15389
DNA (606bp) protein (202aa)
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
id=5224983 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_4_scaffold_24_17
unknown

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15401..15919
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_18
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(15923..17542)
DNA (1620bp) protein (540aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RBG_16_KB1_OP1_55_9_curated
5-oxoprolinase (EC:3.5.2.9)
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1N2N9_9EURY
13_1_40cm_4_scaffold_24_19

Not on your lists

comp(17570..17938)
DNA (369bp) protein (123aa)
Histidine triad (HIT) protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UC69_CELFN
Marine sediment metagenome DNA, contig: S01H1_S37652 {ECO:0000313|EMBL:GAG53266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
histidine triad (HIT) protein
13_1_40cm_4_scaffold_24_20
unknown

Not on your lists

17945..19228
DNA (1284bp) protein (428aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_21
unknown

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comp(19616..20107)
DNA (492bp) protein (164aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_22
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(20208..22286)
DNA (2079bp) protein (693aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEF96043.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEF96043.1};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococc
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBN4_METIK
5-oxoprolinase
13_1_40cm_4_scaffold_24_23
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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22425..23576
DNA (1152bp) protein (384aa)
Exonuclease SbcCD, D subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X0_9ARCH
exonuclease SbcCD, D subunit
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:BAJ48039.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_1_40cm_4_scaffold_24_24
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

23666..25939
DNA (2274bp) protein (758aa)
Exonuclease SbcCD, C subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6X1_9ARCH
exonuclease SbcCD, C subunit
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:BAJ48040.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum sub
13_1_40cm_4_scaffold_24_25
unknown

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comp(25958..26344)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_40cm_4_scaffold_24_26
unknown

Not on your lists


26480..27487
DNA (1008bp) protein (336aa)
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 id=5103039 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Diphthamide synthase, subunit DPH2 n=3 Tax=Methanobrevibacter smithii RepID=A5UMY5_METS3 Tax=AR20
Diphthamide synthase, subunit DPH2
13_1_40cm_4_scaffold_24_27
RBG_16_Archaea_50_20_curated, Archaea

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27488..28102
DNA (615bp) protein (205aa)
Methyltransferase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9N1_METCZ
type 11 methyltransferase; K07579 putative methylase Tax=RBG_16_Archaea_50_20_curated
methyltransferase
13_1_40cm_4_scaffold_24_28
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

comp(28099..31563)
DNA (3465bp) protein (1155aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_4_scaffold_24_29
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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31719..32546
DNA (828bp) protein (276aa)
Putative amidohydrolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC05_9EURY
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_4_scaffold_24_30
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


33217..33453
DNA (237bp) protein (79aa)
50S ribosomal protein L10e n=1 Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8RAE5_DESM0
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L10
Displaying items 1-30 of 56 in total

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