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13_1_40cm_4_scaffold_246

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_246_1
unknown

Not on your lists

98..898
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_40cm_4_scaffold_246_trna_3
unknown

Not on your lists

comp(1101..1174)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_246_2
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1165..1878)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI00036726F7
Integral membrane protein {ECO:0000313|EMBL:KJE77950.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium
hypothetical protein
13_1_40cm_4_scaffold_246_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2029..2565
DNA (537bp) protein (179aa)
DSBA oxidoreductase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB55_GEOOG
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AHG91659.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_246_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

2562..3503
DNA (942bp) protein (314aa)
UPI0003145295 related cluster n=1 Tax=unknown RepID=UPI0003145295
luciferase-like protein Tax=RBG_16_Chloroflexi_68_14_curated
luciferase-like protein
13_1_40cm_4_scaffold_246_5
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3529..5124
DNA (1596bp) protein (532aa)
malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae
Malate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML9_THEM7
13_1_40cm_4_scaffold_246_6
unknown

Not on your lists

comp(5146..5448)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_246_7
unknown

Not on your lists

comp(5595..5933)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_40cm_4_scaffold_246_8
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5878..6582)
DNA (705bp) protein (235aa)
DedA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IH46_ANADE
Alkaline phosphatase {ECO:0000313|EMBL:AKG37414.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
alkaline phosphatase-like protein
13_1_40cm_4_scaffold_246_9
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(6619..7338)
DNA (720bp) protein (240aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2L6_9FIRM
lipoate-protein ligase B
13_1_40cm_4_scaffold_246_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7298..8191)
DNA (894bp) protein (298aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate syntha
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030A5A84
lipoyl synthase
13_1_40cm_4_scaffold_246_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8188..9435)
DNA (1248bp) protein (416aa)
branched-chain alpha-keto acid dehydrogenase E2 component (EC:2.3.1.168)
Branched-chain alpha-keto acid dehydrogenase E2 component {ECO:0000313|EMBL:ABG05405.1}; EC=2.3.1.168 {ECO:0000313|EMBL:ABG05405.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rub
Branched-chain alpha-keto acid dehydrogenase E2 component n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT73_RUBXD
13_1_40cm_4_scaffold_246_12
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

9666..10037
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 148 RepID=E3T6N9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AKG53100.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
isoleucyl-tRNA synthetase
13_1_40cm_4_scaffold_246_trna_2
unknown

Not on your lists

comp(10064..10134)
DNA (71bp)
transferRNA
13_1_40cm_4_scaffold_246_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

10235..10681
DNA (447bp) protein (149aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EE63_9CHLR
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:CCF82975.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacter
flavin reductase domain-containing protein FMN-binding protein
13_1_40cm_4_scaffold_246_14
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10915..11217)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035E6813
TPR repeat-containing protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
hypothetical protein
13_1_40cm_4_scaffold_246_15
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11239..12099
DNA (861bp) protein (287aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ADG07218.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ADG07218.1};; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidi
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTI2_KYRT2
13_1_40cm_4_scaffold_246_trna_1
unknown

Not on your lists

12121..12193
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_246_16
unknown

Not on your lists

12216..12542
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_4_scaffold_246_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12644..13267
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036CF158
Phosphate regulon transcriptional regulatory protein PhoB (SphR) {ECO:0000313|EMBL:CCU61178.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
two component transcriptional regulator, winged helix family
13_1_40cm_4_scaffold_246_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13367..14095
DNA (729bp) protein (243aa)
Glutamate racemase n=1 Tax=Exiguobacterium antarcticum (strain B7) RepID=K0AEZ1_EXIAB
glutamate racemase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
murI; glutamate racemase
13_1_40cm_4_scaffold_246_19
Bacillus infantis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14200..15066
DNA (867bp) protein (289aa)
Heptaprenyl diphosphate synthase subunit II n=2 Tax=Bacillus RepID=U5LCX5_9BACI
heptaprenyl diphosphate synthase subunit II
Heptaprenyl diphosphate synthase subunit II {ECO:0000313|EMBL:AGX05295.1}; TaxID=1367477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus infantis NRRL B-1
13_1_40cm_4_scaffold_246_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15077..16516
DNA (1440bp) protein (480aa)
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABG04924.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ABG04924.1};; EC=4.2.1.75 {ECO:0000313|EMBL:ABG04924.1};; TaxID=2
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
13_1_40cm_4_scaffold_246_21
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16513..17211
DNA (699bp) protein (233aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Dietzia cinnamea P4 RepID=E6J5V7_9ACTO
peptidylprolyl isomerase
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_40cm_4_scaffold_246_22
Selenomonas sp. oral taxon 149, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17259..17528
DNA (270bp) protein (90aa)
Sec-independent protein translocase protein TatA n=1 Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P1Q4_9FIRM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=864563 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="
twin-arginine translocation protein, TatA/E family subunit
13_1_40cm_4_scaffold_246_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17605..18288
DNA (684bp) protein (228aa)
Sec-independent protein translocase subunit TatC; K03118 sec-independent protein translocase protein TatC Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Sec-independent protein translocase subunit TatC; K03118 sec-independent protein translocase protein TatC id=14630466 bin=bin8_Chloro species=Aeromicrobium marinum genus=Aeromicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
sec-independent protein translocase TatC
13_1_40cm_4_scaffold_246_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18285..19019
DNA (735bp) protein (245aa)
Ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ribonuclease PH (EC:2.7.7.56)
ribonuclease PH n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489405
13_1_40cm_4_scaffold_246_25
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19012..19314
DNA (303bp) protein (101aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000255|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_01405}; N
deoxyribonucleotide triphosphate pyrophosphatase n=1 Tax=Deinococcus deserti RepID=UPI0001994C38
deoxyribonucleotide triphosphate pyrophosphatase
Displaying 28 items

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