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13_1_40cm_4_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_255_1
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

1..870
DNA (870bp) protein (290aa)
inner-membrane translocator; K10544 D-xylose transport system permease protein id=14629602 bin=bin8_Chloro species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
inner-membrane translocator; K10544 D-xylose transport system permease protein Tax=CSP1_4_Chloroflexi
xylose transport permease xylH
13_1_40cm_4_scaffold_255_2
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

867..1679
DNA (813bp) protein (271aa)
D-xylose transport ATP-binding protein XylG; K10545 D-xylose transport system ATP-binding protein [EC:3.6.3.17] id=14629603 bin=bin8_Chloro species=Pelagibacterium halotolerans genus=Pelagibacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
D-xylose transport ATP-binding protein XylG; K10545 D-xylose transport system ATP-binding protein [EC:3.6.3.17] Tax=CSP1_4_Chloroflexi
xylG; D-xylose transport system ATP-binding protein
13_1_40cm_4_scaffold_255_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(1676..3046)
DNA (1371bp) protein (457aa)
xylA; xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] id=14629605 bin=bin8_Chloro species=Pseudomonas psychrotolerans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
xylA; xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] Tax=CSP1_4_Chloroflexi
xylA; D-xylose isomerase
13_1_40cm_4_scaffold_255_4

Not on your lists

comp(3095..3670)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000380E706
Marine sediment metagenome DNA, contig: S01H1_S09211 {ECO:0000313|EMBL:GAG02645.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_255_5

Not on your lists

3671..4105
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82GA1_STRAW
Marine sediment metagenome DNA, contig: S03H2_S00240 {ECO:0000313|EMBL:GAH51247.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_1_40cm_4_scaffold_255_6
unknown

Not on your lists

comp(4172..4447)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_255_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4568..5647
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2F7_THEBD
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_255_8
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(5677..6609)
DNA (933bp) protein (311aa)
Putative uncharacterized protein id=1751314 bin=GWB2_Chloroflexi_54_36 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
transcriptional regulator
13_1_40cm_4_scaffold_255_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(6609..7226)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I381_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99718.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_4_scaffold_255_10
unknown

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7392..7628
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_4_scaffold_255_11
unknown

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comp(7642..8253)
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_4_scaffold_255_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8588..9793)
DNA (1206bp) protein (402aa)
DEAD/DEAH box helicase domain-containing protein; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] id=24439676 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DEAD/DEAH box helicase domain-containing protein; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
DEAD/DEAH box helicase
13_1_40cm_4_scaffold_255_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

10314..12470
DNA (2157bp) protein (719aa)
PT repeat-containing protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3R4_SPHTD
PT repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PT repeat-containing protein
13_1_40cm_4_scaffold_255_14
unknown

Not on your lists

comp(12471..12791)
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_4_scaffold_255_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12823..13923
DNA (1101bp) protein (367aa)
Major facilitator superfamily MFS_1 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LTF6_HALO1
Major facilitator transporter {ECO:0000313|EMBL:KFA88762.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sour
transporter
13_1_40cm_4_scaffold_255_16
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(13899..14366)
DNA (468bp) protein (156aa)
N-acetyltransferase GCN5 Tax=CG_Anaero_02
hypothetical protein
13_1_40cm_4_scaffold_255_17
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14363..15247)
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3X9_SPHTD
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ38946.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterinea
13_1_40cm_4_scaffold_255_18
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15213..15548)
DNA (336bp) protein (112aa)
Dipeptide ABC transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCR4_9RHIZ
Dipeptide ABC transporter {ECO:0000313|EMBL:EKF19981.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireducto
ABC transporter permease
13_1_40cm_4_scaffold_255_19
unknown

Not on your lists

15562..15822
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_4_scaffold_255_20
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(16136..17707)
DNA (1572bp) protein (524aa)
ABC transporter substrate binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXT4_9RHIZ
ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=CG_Anaero_02
ABC transporter, substrate binding protein
13_1_40cm_4_scaffold_255_21
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17805..19400)
DNA (1596bp) protein (532aa)
GTP-binding protein HSR1-related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCD8_CELFN
ABC transporter {ECO:0000313|EMBL:KGN33064.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
GTP-binding protein HSR1-like protein
13_1_40cm_4_scaffold_255_22
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19397..21070)
DNA (1674bp) protein (558aa)
Putative ABC transporter n=1 Tax=Nocardioides sp. CF8 RepID=R7XZT3_9ACTO
Putative ABC transporter {ECO:0000313|EMBL:EON24877.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
putative ABC transporter
13_1_40cm_4_scaffold_255_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21347..22288)
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RBG_16_RIF_CHLX_70_13_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIB6_THET1
NAD-dependent epimerase/dehydratase
13_1_40cm_4_scaffold_255_24
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22332..23126
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA54_9GAMM
dioxygenase
Dioxygenase {ECO:0000313|EMBL:AJE03978.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
13_1_40cm_4_scaffold_255_25
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(23133..24257)
DNA (1125bp) protein (375aa)
proline racemase; K01777 proline racemase [EC:5.1.1.4] Tax=RBG_16_Chloroflexi_63_12_curated
proline racemase; K01777 proline racemase [EC:5.1.1.4] id=24449599 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
proline racemase
13_1_40cm_4_scaffold_255_26
unknown

Not on your lists

24289..25128
DNA (840bp) protein (280aa)

This feature has no annotations

13_1_40cm_4_scaffold_255_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(25125..26105)
DNA (981bp) protein (327aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I673_9ACTO
13_1_40cm_4_scaffold_255_28
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26135..26770)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KGA06556.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
Hypothetical membrane protein id=1801697 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
13_1_40cm_4_scaffold_255_29
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

26850..27089
DNA (240bp) protein (80aa)
Putative uncharacterized protein id=3877658 bin=GWC2_Chloroflexi_73_18 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_1_40cm_4_scaffold_255_30
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27285..27647)
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MTR4_9EURY
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ACL03299.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulf
response regulator receiver protein
Displaying items 1-30 of 54 in total

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