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13_1_40cm_4_scaffold_2574

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2574_1
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(1..912)
DNA (912bp) protein (304aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DM01_STAMF
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABN69661.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothe
13_1_40cm_4_scaffold_2574_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(915..2318)
DNA (1404bp) protein (468aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
NADH oxidase (NoxA-2) n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V0X9_PYRAB
NADH oxidase (noxA-2)
13_1_40cm_4_scaffold_2574_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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2415..3221
DNA (807bp) protein (269aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Thaumarchaeota_49_8_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTX7_VULDI
13_1_40cm_4_scaffold_2574_4
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

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3358..4158
DNA (801bp) protein (267aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCT8_HALXS
Fructose-1,6-bisphosphatase class 1
13_1_40cm_4_scaffold_2574_5
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4171..4869
DNA (699bp) protein (233aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-
Triosephosphate isomerase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=TPIS_PYRAB
13_1_40cm_4_scaffold_2574_6
RBG_16_Archaea_50_20_curated, Archaea

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4932..5417
DNA (486bp) protein (162aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] id=24447693 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
cytochrome oxidase assembly family protein
13_1_40cm_4_scaffold_2574_7
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5501..6193
DNA (693bp) protein (231aa)
coxB4; cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase subunit II n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HAG6_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:ELZ81465.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 1
13_1_40cm_4_scaffold_2574_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6198..8618
DNA (2421bp) protein (807aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003758259
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJN58781.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sa
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_40cm_4_scaffold_2574_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8627..8938
DNA (312bp) protein (104aa)
hypothetical protein; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1]
Uncharacterized protein {ECO:0000313|EMBL:EJN58780.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
13_1_40cm_4_scaffold_2574_10
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8928..9896
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4H0_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12659.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_4_scaffold_2574_11
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9992..10483)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KJK42611.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
hypothetical protein id=69447 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Blue (Type1) copper domain-containing protein
13_1_40cm_4_scaffold_2574_12
RBG_16_Archaea_50_20_curated, Archaea

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10581..11513
DNA (933bp) protein (311aa)
geranylgeranylglyceryl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Archaea_50_20_curated
idsA; IdsA (EC:2.5.1.10 2.5.1.1)
IdsA n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NG10_METST
13_1_40cm_4_scaffold_2574_13
RBG_16_Archaea_50_20_curated, Archaea

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11593..11964
DNA (372bp) protein (124aa)
NADH dehydrogenase subunit A (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase, subunit A n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU02_9ARCH
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_2574_14

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11980..12987
DNA (1008bp) protein (336aa)
NADH dehydrogenase (Quinone) (NuoH) {ECO:0000313|EMBL:AIF12408.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF12408.1};; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" source="unculture
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U2_NITGG
13_1_40cm_4_scaffold_2574_15
RBG_16_Archaea_50_20_curated, Archaea

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12996..13490
DNA (495bp) protein (165aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
13_1_40cm_4_scaffold_2574_16
RBG_16_Archaea_50_20_curated, Archaea

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13494..13802
DNA (309bp) protein (103aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14427491 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ndhE; NAD(P)H-quinone oxidoreductase subunit 4L (EC:1.6.5.-)
NADH-ubiquinone oxidoreductase subunit 4L Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_2574_17
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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13809..15314
DNA (1506bp) protein (502aa)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KL51_9ARCH
proton-translocating NADH-quinone oxidoreductase subunit M Tax=RBG_16_Thaumarchaeota_49_8_curated
proton-translocating NADH-quinone oxidoreductase, chain M
13_1_40cm_4_scaffold_2574_18

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15319..17409
DNA (2091bp) protein (697aa)
NADH-ubiquinone oxidoreductase subunit L (NuoL) {ECO:0000313|EMBL:AIF12403.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF12403.1};; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" sourc
NADH dehydrogenase subunit L (EC:1.6.5.3)
proton-translocating NADH-quinone oxidoreductase subunit L id=14427488 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_2574_19
RBG_16_Archaea_50_20_curated, Archaea

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17410..18900
DNA (1491bp) protein (497aa)
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.5.3 1.6.99.5) id=14429497 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase subunit M
13_1_40cm_4_scaffold_2574_20
RBG_16_Archaea_50_20_curated, Archaea

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18907..20376
DNA (1470bp) protein (490aa)
NADH-ubiquinone oxidoreductase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
Proton-translocating NADH-quinone oxidoreductase, chain N n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUR2_9ARCH
Proton-translocating NADH-quinone oxidoreductase, chain N
13_1_40cm_4_scaffold_2574_21
unknown

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comp(20362..20937)
DNA (576bp) protein (192aa)

This feature has no annotations

13_1_40cm_4_scaffold_2574_22
RBG_16_Archaea_50_20_curated, Archaea

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21072..21389
DNA (318bp) protein (106aa)
hypothetical protein; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] Tax=RBG_16_Archaea_50_20_curated
V-type ATP synthase subunit H (EC:3.6.3.14); K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14]
13_1_40cm_4_scaffold_2574_23
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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21393..21998
DNA (606bp) protein (202aa)
V-type ATP synthase subunit E n=1 Tax=Thermococcus zilligii RepID=UPI00029A42A3
A1A0 archaeal ATP synthase subunit E AhaE
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
13_1_40cm_4_scaffold_2574_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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22010..23995
DNA (1986bp) protein (662aa)
Archaeal/vacuolar-type H+-ATPase subunit I n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BND0_9EURY
V-type ATPase 116 kDa subunit Tax=RBG_13_Bathyarchaeota_46_16b_curated
ntpI; V-type sodium ATPase subunit I
13_1_40cm_4_scaffold_2574_25
Osmerus mordax, Osmerus, Osmeriformes, Neopterygii, Chordata, Metazoa

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24000..24482
DNA (483bp) protein (161aa)
PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit n=1 Tax=Jaculus jaculus RepID=UPI00033323E9
Vacuolar ATP synthase 16 kDa proteolipid subunit {ECO:0000313|EMBL:ACO10169.1}; TaxID=8014 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleo
ATP synthase subunit c
13_1_40cm_4_scaffold_2574_26
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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24573..25568
DNA (996bp) protein (332aa)
V-type ATP synthase subunit C n=2 Tax=Methanosaeta harundinacea RepID=G7WL75_METH6
ATP synthase a1, c subunit
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
13_1_40cm_4_scaffold_2574_27
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25815..26858)
DNA (1044bp) protein (348aa)
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
2-nitropropane dioxygenase NPD n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P7V2_STRVO
2-nitropropane dioxygenase
13_1_40cm_4_scaffold_2574_28
unknown

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comp(26951..27556)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_4_scaffold_2574_29
unknown

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comp(27571..28521)
DNA (951bp) protein (317aa)

This feature has no annotations

13_1_40cm_4_scaffold_2574_30
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(28537..30729)
DNA (2193bp) protein (731aa)
inorganic pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N534_9ARCH
Displaying items 1-30 of 37 in total

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